RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 PIGXQ8TBF5 258 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 SLC38A4Q969I6 547 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 SLC47A1Q96FL8 570 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF300Q96RE9 604 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-211ENST00000578187 MCHR1Q99705 422 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 SPAG4Q9NPE6 437 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ARL8BQ9NVJ2 186 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 BAG5Q9UL15 447 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 A0A087WUJ7 227 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 FTCDNL1E5RQL4 147 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 EIF1BO60739 113 aaKnown RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 RAMP1O60894 148 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 AHSA1O95433 338 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 IFNA14P01570 189 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 GPIP06744 558 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 CCKARP32238 428 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 CEACAM7Q14002 265 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 OR7A5Q15622 319 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 CYBRD1Q53TN4 286 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 TFAP2EQ6VUC0 442 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 TSPYL5Q86VY4 417 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 CXorf67Q86X51 503 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 RBM45Q8IUH3 476 aaKnown RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 VANGL1Q8TAA9 524 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 PROX1Q92786 737 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 BDH2Q9BUT1 245 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 PTDSS2Q9BVG9 487 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 GSX1Q9H4S2 264 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 C12orf49Q9H741 205 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 SLC9A8Q9Y2E8 581 aa11.32□□□□□ -0.6
CCDC57-211ENST00000578187 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
CCDC57-211ENST00000578187 AQP7P3A6NL99 342 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CXCR6O00574 342 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CHP2O43745 196 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 LYPD3O95274 346 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 P2RY4P51582 365 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CDH12P55289 794 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 ENTPD8Q5MY95 495 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 ANKRD34AQ69YU3 496 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 PRSS57Q6UWY2 283 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CLEC9AQ6UXN8 241 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CARM1Q86X55 608 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 PGAM4Q8N0Y7 254 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 STEAP2Q8NFT2 490 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-211ENST00000578187 KCTD14Q9BQ13 255 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-211ENST00000578187 NAA11Q9BSU3 229 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-211ENST00000578187 TMEM43Q9BTV4 400 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 TAPBPLQ9BX59 468 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 HDHD5Q9BXW7 423 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 OR10A4Q9H209 315 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 EMC3Q9P0I2 261 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 SH3GLB1Q9Y371 365 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF469Q96JG9 3925 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 TRAV36DV7A0A075B6V5 113 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 GPR171O14626 319 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 TMCC2O75069 709 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 AKR7A3O95154 331 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 THY1P04216 161 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 GGT1P19440 569 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 TNFRSF1BP20333 461 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 RPS5P46782 204 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 OR3A2P47893 321 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 SELENOWP63302 87 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 LTBQ06643 244 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 FXNQ16595 210 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 OTUD3Q5T2D3 398 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 FAM69AQ5T7M9 428 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 WDR88Q6ZMY6 472 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 GABRG1Q8N1C3 465 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 TMEM99Q8N816 258 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 OR6S1Q8NH40 331 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 ADAMTS16Q8TE57 1224 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 TMEM171Q8WVE6 324 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 PERPQ96FX8 193 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF426Q9BUY5 554 aa11.3□□□□□ -0.6
CCDC57-211ENST00000578187 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 POLR2J2Q9GZM3 115 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 POLR2J3Q9H1A7 115 aaKnown RBP11.3□□□□□ -0.6
CCDC57-211ENST00000578187 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms