RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 IL7RP16871 459 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 SELENOPP49908 381 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 TUBA1BP68363 451 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 TUBA4AP68366 448 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 IL1RL1Q01638 556 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 LGALS3BPQ08380 585 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 EPS8Q12929 822 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 TRIP10Q15642 601 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 FAM174BQ3ZCQ3 159 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 PRAMEF8Q5VWM4 474 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 PRAMEF7Q5VXH5 474 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 NIPAL3Q6P499 406 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 DEF8Q6ZN54 512 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZCCHC23Q6ZST2 131 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 CREB3L2Q70SY1 520 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 TUBA1AQ71U36 451 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZCCHC24Q8N2G6 241 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 IL17RDQ8NFM7 739 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 SEMA6DQ8NFY4 1073 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 CKAP2Q8WWK9 683 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZIM3Q96PE6 472 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC35A5Q9BS91 424 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 LINC00470Q9BZP3 86 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 DPY30Q9C005 99 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 RASD1Q9Y272 281 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 GRIP1Q9Y3R0 1128 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 A8MVM7 634 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 HMGN4O00479 90 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 DBIP07108 87 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 ADRA2AP08913 450 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 CBR1P16152 277 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 ARR3P36575 388 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 COPZ1P61923 177 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 TXNL4AP83876 142 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 ROR2Q01974 943 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 POU3F1Q03052 451 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 HGFACQ04756 655 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 DPY19L1Q2PZI1 675 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 MRPL2Q5T653 305 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 GSPT2Q8IYD1 628 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 TRIML2Q8N7C3 387 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 GCDHQ92947 438 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 TMEM186Q96B77 213 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 TESCQ96BS2 214 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 RHOXF2Q9BQY4 288 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC38A1Q9H2H9 487 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 NELFAQ9H3P2 528 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 MTHFD2LQ9H903 347 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 SEC61A2Q9H9S3 476 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 CMAHPQ9Y471 501 aa10.07□□□□□ -0.8
CTDNEP1-212ENST00000576613 A0A096LPI6 279 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 PRAMEF27A3QJZ7 478 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 FRS3O43559 492 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 UPK3AO75631 287 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 MSMBP08118 114 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CHRM4P08173 479 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CELA3BP08861 270 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 NUDT17P0C025 328 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 NR2F1P10589 423 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 RPS4Y1P22090 263 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 GTF2E2P29084 291 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 ARRB2P32121 409 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 NPRL3Q12980 569 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 SNTB2Q13425 540 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 DAG1Q14118 895 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CASP8Q14790 479 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 SYPL1Q16563 259 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 C1orf140Q5VVS0 124 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 REP15Q6BDI9 236 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 WBP2NLQ6ICG8 309 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 LRRC74BQ6ZQY2 392 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 LINGO2Q7L985 606 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 RNF130Q86XS8 419 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CCDC36Q8IYA8 594 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 PEX5LQ8IYB4 626 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CDK20Q8IZL9 346 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CADM2Q8N3J6 435 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 ANKFN1Q8N957 763 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 JMJD8Q96S16 334 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 TPK1Q9H3S4 243 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 MS4A5Q9H3V2 200 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 CRLF2Q9HC73 371 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 HIF1ANQ9NWT6 349 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC17A7Q9P2U7 560 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 RCE1Q9Y256 329 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 MGAM2Q2M2H8 2515 aa10.06□□□□□ -0.8
CTDNEP1-212ENST00000576613 TMEM129A0AVI4 362 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 CDHR4A6H8M9 788 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 FAM157AC9JC47 383 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 LYNX1G3V0Z9 82 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 RPL36A-HNRNPH2H7BZ11 118 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 M0R233 179 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 SYNGR3O43761 229 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC43A1O75387 559 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms