RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LASP1Q14847 261 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 SLC17A1Q14916 467 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 SLC9A3R2Q15599 337 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 KRT71Q3SY84 523 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 VAX1Q5SQQ9 334 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMG6-219ENST00000575663 MROH9Q5TGP6 573 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 OLFML2AQ68BL7 652 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 GPRIN3Q6ZVF9 776 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TUBA1AQ71U36 451 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 RPS27LQ71UM5 84 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 AAED1Q7RTV5 226 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CCDC103Q8IW40 242 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 PEX5LQ8IYB4 626 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 DRAXINQ8NBI3 349 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 ZNF563Q8TA94 476 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 METTL6Q8TCB7 284 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ST7LQ8TDW4 575 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ACMSDQ8TDX5 336 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CDS1Q92903 461 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 RAB8BQ92930 207 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 YIPF5Q969M3 257 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TLCD1Q96CP7 247 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 DDIT4LQ96D03 193 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 DNAJA3Q96EY1 480 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 AURKBQ96GD4 344 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 TIMD4Q96H15 378 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 C1orf147Q96MC9 270 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 ALKBH3Q96Q83 286 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 SH3GL1Q99961 368 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 GAL3ST1Q99999 423 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 SYT3Q9BQG1 590 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 THUMPD3Q9BV44 507 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 RSPO3Q9BXY4 272 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 MRPL37Q9BZE1 423 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 PIGUQ9H490 435 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 SEC61A2Q9H9S3 476 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CRLF2Q9HC73 371 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ZCCHC3Q9NUD5 404 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 ACER3Q9NUN7 267 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 MKS1Q9NXB0 559 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TMEM181Q9P2C4 612 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 OPN4Q9UHM6 478 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 KLHL21Q9UJP4 597 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 POLR3HQ9Y535 204 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 NBEAL2Q6ZNJ1 2754 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPIAL4EA0A075B759 164 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 A0A096LPE4 126 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPIAL4CA0A0B4J2A2 164 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 A0A1W2PPZ6 126 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 A0A1W2PRQ8 180 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 A8MT66 165 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPIAL4DF5H284 164 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPP6CO00743 305 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 RP2O75695 350 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 RSL1D1O76021 490 aaKnown RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 SUPT7LO94864 414 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ENO1P06733 434 aaKnown RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 INHBAP08476 426 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 UBTFL6P0CB48 400 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPIAL4FP0DN26 164 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 CBR1P16152 277 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 OMGP23515 440 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 HTR3AP46098 478 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ASMTP46597 345 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 CAPZA2P47755 286 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 HTR6P50406 440 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 H3F3AP84243 136 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GALK2Q01415 458 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 CLCQ05315 142 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 SKP2Q13309 424 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PDCD1Q15116 288 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 TAF9Q16594 264 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PRSS53Q2L4Q9 553 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 C2orf68Q2NKX9 166 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 TUSC1Q2TAM9 212 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PDZK1Q5T2W1 519 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 AVPI1Q5T686 147 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GKAP1Q5VSY0 366 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 PAQR6Q6TCH4 344 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 TIFABQ6ZNK6 161 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 Q6ZPA2 131 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GRINAQ7Z429 371 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GPAT4Q86UL3 456 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 WDFY1Q8IWB7 410 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 KIR3DL3Q8N743 410 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 MRAPQ8TCY5 172 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 MGARPQ8TDB4 240 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ADAMTS15Q8TE58 950 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 DCAKDQ8WVC6 231 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 BCL2L2Q92843 193 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 CIDECQ96AQ7 238 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 PPCDCQ96CD2 204 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ZNF764Q96H86 408 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 DHRS1Q96LJ7 313 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GPR78Q96P69 363 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ZNF382Q96SR6 550 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms