RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 FABP12A6NFH5 140 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 HIST1H2ABP04908 130 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CD14P08571 375 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 ACVR1BP36896 505 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CAPZA2P47755 286 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 DIO1P49895 249 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 ACTA2P62736 377 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 ACTG2P63267 376 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 DCDP81605 110 aaKnown RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CBFBQ13951 182 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SLC35D3Q5M8T2 416 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 HIST3H2AQ7L7L0 130 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 ANKRD37Q7Z713 158 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CADM3Q8N126 398 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 LSM14AQ8ND56 463 aaKnown RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 NAT6Q93015 286 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 HIST1H2ACQ93077 130 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 DNAJA3Q96EY1 480 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 DDOQ99489 341 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 PRMT8Q9NR22 394 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 C4orf47A7E2U8 309 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 MAGEB4O15481 346 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CDC40O60508 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SELENOFO60613 162 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SLC25A12O75746 678 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 TDGF1P13385 188 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CD53P19397 219 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SDHAP31040 664 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 UQCRC1P31930 480 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 CDKN2AP42771 156 aaKnown RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 RPL18Q07020 188 aaKnown RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 TRAM1Q15629 374 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 FAM122BQ7Z309 247 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 APCDD1LQ8NCL9 501 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-208ENST00000574755 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 SRRQ9GZT4 340 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 GRHPRQ9UBQ7 328 aa12.78□□□□□ -0.36
VPS33B-208ENST00000574755 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 ALOX12BO75342 701 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 APOA1P02647 267 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 GP1BBP13224 206 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.36
VPS33B-208ENST00000574755 MTNR1BP49286 362 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 PPP3R1P63098 170 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.77□□□□□ -0.36
VPS33B-208ENST00000574755 GLYR1Q49A26 553 aaPredicted RBP12.77□□□□□ -0.36
VPS33B-208ENST00000574755 PPP1R3BQ86XI6 285 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 LRRC75AQ8NAA5 344 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 ATF6BQ99941 703 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 SLC6A5Q9Y345 797 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.36
VPS33B-208ENST00000574755 WDFY3Q8IZQ1 3526 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 FAM171A2A8MVW0 826 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 FADS1O60427 444 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 TMCC2O75069 709 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 CFL1P23528 166 aaKnown RBP12.77□□□□□ -0.37
VPS33B-208ENST00000574755 P2RX1P51575 399 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 IL10RAQ13651 578 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 BAK1Q16611 211 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 PHF19Q5T6S3 580 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 DMKNQ6E0U4 476 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-208ENST00000574755 LYPD4Q6UWN0 246 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 PRR23CQ6ZRP0 262 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 SYS1Q8N2H4 156 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 TP53INP1Q96A56 240 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 SEMA4CQ9C0C4 833 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 NDEL1Q9GZM8 345 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 FKRPQ9H9S5 495 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 APMAPQ9HDC9 416 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 GNG8Q9UK08 70 aa12.77□□□□□ -0.37
VPS33B-208ENST00000574755 YKT6O15498 198 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 CPNE3O75131 537 aaKnown RBP12.76□□□□□ -0.37
VPS33B-208ENST00000574755 GLCEO94923 617 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 SPNP16150 400 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 QPRTQ15274 297 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 FAM27D1Q5T7N8 215 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 XKRXQ6PP77 449 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 OVCH1Q7RTY7 1134 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 CEACAM19Q7Z692 300 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 ABHD4Q8TB40 342 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 IFI44Q8TCB0 444 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 GHSRQ92847 366 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms