RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ENPP4Q9Y6X5 453 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF716A6NP11 495 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 FTCDNL1E5RQL4 147 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 MRPL33O75394 65 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 PDE5AO76074 875 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 IGF2P01344 180 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 MT-ND1P03886 318 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 THY1P04216 161 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 UMPSP11172 480 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 POU2F1P14859 743 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF43P17038 809 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 GRPRP30550 384 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 CD79BP40259 229 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 YAP1P46937 504 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 SMIM11AP58511 58 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 TRAP1Q12931 704 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 SLC17A1Q14916 467 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 LCN8Q6JVE9 175 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 CYP2R1Q6VVX0 501 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF610Q8N9Z0 462 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 CCDC124Q96CT7 223 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 SLC7A6OSQ96CW6 309 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF300Q96RE9 604 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 PRSS27Q9BQR3 290 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF426Q9BUY5 554 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ENKD1Q9H0I2 346 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 ANKRD19PQ9H560 264 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 FKRPQ9H9S5 495 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 NANSQ9NR45 359 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 V9GYQ6 96 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 FREM1Q5H8C1 2179 aa11.35□□□□□ -0.59
TRAPPC1-206ENST00000573989 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 C19orf84I3L1E1 186 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 M0R082 166 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 EBAG9O00559 213 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 KPNA4O00629 521 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 AKAP8O43823 692 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 FZD7O75084 574 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 OR6A2O95222 327 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 LYPD3O95274 346 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 CNOT4O95628 575 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 CH25HO95992 272 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 BGLAPP02818 100 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 FABP3P05413 133 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 HOXB6P17509 224 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 KLK2P20151 261 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 PTNP21246 168 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 OR3A2P47893 321 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 C1DQ13901 141 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 POU4F3Q15319 338 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 EXOC3L2Q2M3D2 409 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 WDR88Q6ZMY6 472 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 CCDC121Q6ZUS5 278 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 NUFIP2Q7Z417 695 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 TSPYL5Q86VY4 417 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 NKAIN4Q8IVV8 208 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 CDK20Q8IZL9 346 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 RNF113BQ8IZP6 322 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 OR9K2Q8NGE7 335 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 OR5J2Q8NH18 312 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF417Q8TAU3 575 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 TMEM255BQ8WV15 326 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 APH1AQ96BI3 265 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF775Q96BV0 537 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 OXGR1Q96P68 337 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF347Q96SE7 839 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF587Q96SQ5 575 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 MMADHCQ9H3L0 296 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 KRCC1Q9NPI7 259 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 NPDC1Q9NQX5 325 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 MRPL39Q9NYK5 338 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 NDRG3Q9UGV2 375 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF229Q9UJW7 825 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 ING1Q9UK53 422 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 FLVCR1Q9Y5Y0 555 aa11.34□□□□□ -0.59
TRAPPC1-206ENST00000573989 HECTD1Q9ULT8 2610 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 TUBAL3A6NHL2 446 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 ENO4A6NNW6 628 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 J3KTA2 159 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 hCG_2039718K7EN88 272 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 RAMP1O60894 148 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 H1F0P07305 194 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 IGFBP2P18065 325 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 CBLP22681 906 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 COL8A1P27658 744 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 KIR2DL3P43628 341 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 CBX1P83916 185 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 CHRNB3Q05901 458 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 PUDPQ08623 228 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 FOXD4Q12950 439 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 P2RY6Q15077 328 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF74Q16587 644 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms