RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 C1orf216Q8TAB5 229 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 EVA1AQ9H8M9 152 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 CA5BQ9Y2D0 317 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 V9GY05 133 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 A0A1W2PPL8 197 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ZFPL1O95159 310 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 PVRP15151 417 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 SPI1P17947 270 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 GRPRP30550 384 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 PPP2CBP62714 309 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 PPP2CAP67775 309 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ILF3Q12906 894 aaKnown RBP eCLIP14.33□□□□□ -0.12
NUP88-207ENST00000573584 GXYLT1Q4G148 440 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ELFN2Q5R3F8 820 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 UXS1Q8NBZ7 420 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 OR2T4Q8NH00 348 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ZPLD1Q8TCW7 415 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 OBP2AQ9NY56 170 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 COQ3Q9NZJ6 369 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 MGAT4CQ9UBM8 478 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 POMT2Q9UKY4 750 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 H0Y8X5 98 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 OR10H2O60403 315 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 IGKV1D-16P01601 117 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ALDOBP05062 364 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 PTHLHP12272 177 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 PTH2RP49190 550 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 EPHA4P54764 986 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
NUP88-207ENST00000573584 OPCMLQ14982 345 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 TMEM69Q5SWH9 247 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 DPY19L2P2Q6ZN68 376 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 YAF2Q8IY57 180 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 OR6V1Q8N148 313 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 EID2Q8N6I1 236 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 SYNPRQ8TBG9 265 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 GDE1Q9NZC3 331 aa14.33□□□□□ -0.12
NUP88-207ENST00000573584 ATG2BQ96BY7 2078 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 A0A1B0GVT2 93 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 FAM171A2A8MVW0 826 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 SERPINI2O75830 405 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 FAM53BQ14153 422 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 FAAP20Q6NZ36 180 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 GLDNQ6ZMI3 551 aaPredicted RBP14.32□□□□□ -0.12
NUP88-207ENST00000573584 HDDC2Q7Z4H3 204 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 CA13Q8N1Q1 262 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 MEIOBQ8N635 442 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ANKRD9Q96BM1 317 aaPredicted RBP14.32□□□□□ -0.12
NUP88-207ENST00000573584 PLA2G2FQ9BZM2 168 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 TAS2R10Q9NYW0 307 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 HCN3Q9P1Z3 774 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ZNF69Q9UC07 566 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 FKBP7Q9Y680 259 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 USP34Q70CQ2 3546 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ERVK-25P63136 954 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 GPR18Q14330 331 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ZNHIT3Q15649 155 aaPredicted RBP14.32□□□□□ -0.12
NUP88-207ENST00000573584 STPG1Q5TH74 334 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 PWWP2BQ6NUJ5 590 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 CHMP1BQ7LBR1 199 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ZNF550Q7Z398 422 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 RASD2Q96D21 266 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 LCORQ96JN0 433 aaPredicted RBP14.32□□□□□ -0.12
NUP88-207ENST00000573584 GPR174Q9BXC1 333 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 TRPV4Q9HBA0 871 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.32□□□□□ -0.12
NUP88-207ENST00000573584 RDH8Q9NYR8 311 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 OR5V1Q9UGF6 321 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 PCOLCE2Q9UKZ9 415 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 FOXJ3Q9UPW0 622 aa14.32□□□□□ -0.12
NUP88-207ENST00000573584 SULT1B1O43704 296 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 GALR3O60755 368 aaPredicted RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 C4BPBP20851 252 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 PRKACBP22694 351 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 SLC35D3Q5M8T2 416 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 SLC35F3Q8IY50 421 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 RGP1Q92546 391 aaPredicted RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 TSPAN10Q9H1Z9 355 aaPredicted RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 CA10Q9NS85 328 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 STARD5Q9NSY2 213 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 PIPOXQ9P0Z9 390 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 ANKRD20A5PA0PJZ0 165 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 RASGRP1O95267 797 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 ANXA7P20073 488 aaKnown RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 DCTDP32321 178 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 P2RX1P51575 399 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 GPR143P51810 404 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 NDUFAF6Q330K2 333 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 LINC00303Q3SY05 128 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 SPICQ8N5J4 248 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 SFXN2Q96NB2 322 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 RWDD3Q9Y3V2 267 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 A0A087WV48 116 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 A0A1B0GTQ1 180 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 GRXCR1A8MXD5 290 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 RPP14O95059 124 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms