RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ATP4BP51164 291 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 COPZ1P61923 177 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ADAM8P78325 824 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 H3F3AP84243 136 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 EGR3Q06889 387 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 FADDQ13158 208 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 P2RY6Q15077 328 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 TSC22D1Q15714 1073 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ACKR1Q16570 336 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 LIN52Q52LA3 116 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 AGKQ53H12 422 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ZNF311Q5JNZ3 666 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 PAGE3Q5JUK9 113 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 LRIF1Q5T3J3 769 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 WBP2NLQ6ICG8 309 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ZNF836Q6ZNA1 936 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 Q6ZT83 130 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 GALNT5Q7Z7M9 940 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 TGIF2LYQ8IUE0 185 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ZNF100Q8IYN0 542 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 CLIP4Q8N3C7 705 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 HSD17B8Q92506 261 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 S100PBPQ96BU1 408 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 THOC1Q96FV9 657 aaKnown RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 TMEM19Q96HH6 336 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 HRASLS5Q96KN8 279 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 NAA11Q9BSU3 229 aaPredicted RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 RABEP2Q9H5N1 569 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 UBTD1Q9HAC8 227 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 CACYBPQ9HB71 228 aaKnown RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 BCL2L10Q9HD36 194 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 NGBQ9NPG2 151 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 SLC52A3Q9NQ40 469 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 BEX4Q9NWD9 120 aaPredicted RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 PRSS50Q9UI38 385 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 ZNF443Q9Y2A4 671 aaPredicted RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 NOSIPQ9Y314 301 aaKnown RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
NUP88-205ENST00000572809 ABCA4P78363 2273 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 AKAP6Q13023 2319 aa6.58□□□□□ -1.36
NUP88-205ENST00000572809 IGKV3D-15A0A087WSY6 115 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 A0A1W2PP18 115 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 ZNF716A6NP11 495 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 EVPLLA8MZ36 301 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 C5orf58C9J3I9 102 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 NR5A2O00482 541 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 GPR171O14626 319 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 MRPL33O75394 65 aaKnown RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 PGM3O95394 542 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 CNOT4O95628 575 aaKnown RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 HOXB9P17482 250 aaPredicted RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 PPIBP23284 216 aaKnown RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 NR1H2P55055 460 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 SLC35A1P78382 337 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 NKX6-1P78426 367 aaPredicted RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 SQLEQ14534 574 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 TAB1Q15750 504 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 RNF220Q5VTB9 566 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 PRAMEF8Q5VWM4 474 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 PRAMEF7Q5VXH5 474 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 ABLIM2Q6H8Q1 611 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 BHLHA15Q7RTS1 189 aaPredicted RBP6.57□□□□□ -1.36
NUP88-205ENST00000572809 CCDC103Q8IW40 242 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 MSRB3Q8IXL7 192 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 CADM2Q8N3J6 435 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 PIGXQ8TBF5 258 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 MAL2Q969L2 176 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 POTEKPQ9BYX7 375 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 A4GALTQ9NPC4 353 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 PARPBPQ9NWS1 579 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 SLC25A37Q9NYZ2 338 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 EMC3Q9P0I2 261 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 VAPAQ9P0L0 249 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 CHST2Q9Y4C5 530 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 U3KQE9 123 aa6.57□□□□□ -1.36
NUP88-205ENST00000572809 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 F8P00451 2351 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ZC3H12DA2A288 527 aaKnown RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 A8MVM7 634 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ARHGEF9O43307 516 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 EDF1O60869 148 aaKnown RBP6.56□□□□□ -1.36
NUP88-205ENST00000572809 RAMP1O60894 148 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SMPD2O60906 423 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 LYZL6O75951 148 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 PLAUP00749 431 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 IGHV3-9P01782 118 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 GPIP06744 558 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 PRG2P13727 222 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 ETS2P15036 469 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 GPX2P18283 190 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 IGHV1-2P23083 117 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 EDNRAP25101 427 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 IDUAP35475 653 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 SLC16A1P53985 500 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 CDK6Q00534 326 aa6.56□□□□□ -1.36
NUP88-205ENST00000572809 BNIP2Q12982 314 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms