RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 GRTP1Q5TC63 336 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 PDPK2PQ6A1A2 396 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 H3F3CQ6NXT2 135 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ARHGAP11AQ6P4F7 1023 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 LRRC8BQ6P9F7 803 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 TMEM205Q6UW68 189 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 C12orf54Q6X4T0 127 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 RGS9BPQ6ZS82 235 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 FAM47EQ6ZV65 393 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MEPCEQ7L2J0 689 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 PRSS41Q7RTY9 318 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 C16orf82Q7Z2V1 217 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ANKRD37Q7Z713 158 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 LUZP2Q86TE4 346 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 RPS19BP1Q86WX3 136 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MUC20Q8N307 709 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 AMER3Q8N944 861 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 LINC01555Q8NAE3 123 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CAMKVQ8NCB2 501 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CKAP2Q8WWK9 683 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 METTL21AQ8WXB1 218 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 SLAMF9Q96A28 289 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MTERF3Q96E29 417 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ZBED6CLQ96FA7 236 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 PIK3IP1Q96FE7 263 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CFAP36Q96G28 342 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 C10orf90Q96M02 699 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ERGIC2Q96RQ1 377 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 SECISBP2Q96T21 854 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 REG4Q9BYZ8 158 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 VN1R1Q9GZP7 353 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 THAP2Q9H0W7 228 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ASB8Q9H765 288 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 EXO5Q9H790 373 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 COG4Q9H9E3 785 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ABCF3Q9NUQ8 709 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 NDE1Q9NXR1 346 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MALT1Q9UDY8 824 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ATPIF1Q9UII2 106 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 DNPEPQ9ULA0 475 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ASF1AQ9Y294 204 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 N6AMT1Q9Y5N5 214 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ARL5AQ9Y689 179 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 WNK1Q9H4A3 2382 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 RAI1Q7Z5J4 1906 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GOLGA8QA0A0J9YX86 632 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 A0A1B0GVG6 124 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 A0A1W2PPQ1 181 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ELOVL7A1L3X0 281 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GOLGA8OA6NCC3 632 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ARHGEF33A8MVX0 844 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GOLGA8NF8WBI6 632 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 H0YGG7 62 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GOLGA8RI6L899 631 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CASKO14936 926 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 EPHB6O15197 1021 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PSMG1O95456 288 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CALB1P05937 261 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 OCM2P0CE71 109 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 OCMP0CE72 109 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CDH1P12830 882 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 UQCRBP14927 111 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 UCHL3P15374 230 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CA4P22748 312 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CETN2P41208 172 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 MAGEA5P43359 124 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 HCAR3P49019 387 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ASCL1P50553 236 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 BCAP31P51572 246 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 RAP1GDS1P52306 607 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 AIF1P55008 147 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 FOXG1P55316 489 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ATP5J2P56134 94 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 POLR2FP61218 127 aaKnown RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GBE1Q04446 702 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF273Q14593 569 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 KRT31Q15323 416 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 RPS6KA1Q15418 735 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ACKR1Q16570 336 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CLEC12BQ2HXU8 276 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF829Q3KNS6 432 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SFT2D3Q587I9 215 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CCNJQ5T5M9 372 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ATAD3BQ5T9A4 648 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 FAM91A1Q658Y4 838 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SUSD1Q6UWL2 747 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PRSS57Q6UWY2 283 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 APTXQ7Z2E3 356 aaKnown RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PAQR7Q86WK9 346 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PTOV1Q86YD1 416 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PHF13Q86YI8 300 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SLC13A5Q86YT5 568 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PLD3Q8IV08 490 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 MCOLN2Q8IZK6 566 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 LRRC75A-AS1Q8N1F1 130 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ICA1LQ8NDH6 482 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 OR9A4Q8NGU2 314 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms