RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 DLX5P56178 289 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 RUNX3Q13761 415 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 PRSS42Q7Z5A4 293 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 JAZF1Q86VZ6 243 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 GRAMD2AQ8IUY3 354 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 C12orf76Q8N812 135 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TTYH1Q9H313 450 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 RXFP3Q9NSD7 469 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 MED11Q9P086 117 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 KLK11Q9UBX7 282 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 A0A1B0GW55 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 MCIDASD6RGH6 385 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 TSPAN4O14817 238 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 NKX2-2O95096 273 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ADRB1P08588 477 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L2P0CJ85 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L3P0CJ86 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L4P0CJ87 422 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L5P0CJ88 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L6P0CJ89 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4L7P0CJ90 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 SPI1P17947 270 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DPP4P27487 766 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 GJA4P35212 333 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ACTR1BP42025 376 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 SOX9P48436 509 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 P2RX1P51575 399 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 PSMD4P55036 377 aaKnown RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 CLDN12P56749 244 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 GMFBP60983 142 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ACTR1AP61163 376 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 NSMAFQ92636 917 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 SLC25A38Q96DW6 304 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 NMNAT3Q96T66 252 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 GINS4Q9BRT9 223 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 IL21RQ9HBE5 538 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 C12orf4Q9NQ89 552 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DUX4Q9UBX2 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 FOXJ3Q9UPW0 622 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 A0A1B0GVT2 93 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ACSM4P0C7M7 580 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ZP3P21754 424 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DHODHQ02127 395 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 PRICKLE4Q2TBC4 344 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 EXOSC6Q5RKV6 272 aaKnown RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DENND4AQ7Z401 1863 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 KCTD20Q7Z5Y7 419 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 GPAT4Q86UL3 456 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 LSRQ86X29 649 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 TMEFF1Q8IYR6 380 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 OR52R1Q8NGF1 315 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 TRIM43Q96BQ3 446 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 HAVCR1Q96D42 359 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF426Q9BUY5 554 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 SDHAF2Q9NX18 166 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ANXA2P2A6NMY6 339 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 CTSVO60911 334 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 RBBP9O75884 186 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 RPP14O95059 124 aaKnown RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 NDUFB6O95139 128 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ANXA2P07355 339 aaKnown RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 IFI6P09912 130 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 EMDP50402 254 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 LINC00303Q3SY05 128 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ENPP7Q6UWV6 458 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 C10orf53Q8N6V4 93 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DNAAF1Q8NEP3 725 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 MIB2Q96AX9 1013 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ORAI1Q96D31 301 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 TMPRSS13Q9BYE2 586 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 DNAJB12Q9NXW2 375 aaKnown RBP9.87□□□□□ -0.83
CCDC40-207ENST00000572253 COPS3Q9UNS2 423 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF337Q9Y3M9 751 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 ADAM18Q9Y3Q7 739 aa9.87□□□□□ -0.83
CCDC40-207ENST00000572253 BET1O15155 118 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PIN1P1O15428 100 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 NARSO43776 548 aaKnown RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 DNAJB6O75190 326 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 GLCEO94923 617 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 EGFP01133 1207 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 RLN1P04808 185 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 CDK2P24941 298 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 IL10RAQ13651 578 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 Q499Y3 187 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF626Q68DY1 528 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PWWP2BQ6NUJ5 590 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 CCDC3Q9BQI4 270 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 TAS2R8Q9NYW2 309 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ACTR10Q9NZ32 417 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 OR5V1Q9UGF6 321 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 RWDD3Q9Y3V2 267 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PLSCR5A0PG75 271 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 H0YGG7 62 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ARPC3O15145 178 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 TPPPO94811 219 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 GRPRP30550 384 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PTH2RP49190 550 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PRPS1P60891 318 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ARF3P61204 181 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms