RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 P2RY4P51582 365 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 CLDN8P56748 225 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 NPRL3Q12980 569 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 SNTB2Q13425 540 aaKnown RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 TMEM225Q6GV28 225 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 KRT80Q6KB66 452 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 CREB3L2Q70SY1 520 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 CARM1Q86X55 608 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 HOMEZQ8IX15 550 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 GSPT2Q8IYD1 628 aaKnown RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 CLDND2Q8NHS1 167 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 MAGEE2Q8TD90 523 aaPredicted RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 ZNF317Q96PQ6 595 aaPredicted RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 SPEF1Q9Y4P9 236 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 ZNF503-AS2A6NEH8 195 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 VSTM5A8MXK1 200 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 UQCRC2P22695 453 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 CXCR1P25024 350 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 MAP2K6P52564 334 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 ROR2Q01974 943 aaKnown RBP17.13■□□□□ 0.33
CCDC40-206ENST00000572083 EPS8Q12929 822 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 BNIP2Q12982 314 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 SAXO2Q658L1 398 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 PEG10Q86TG7 708 aaKnown RBP17.13■□□□□ 0.33
CCDC40-206ENST00000572083 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
CCDC40-206ENST00000572083 FAM216AQ8WUB2 273 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 PIF1Q9H611 641 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 ZDHHC2Q9UIJ5 367 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 PCDHB10Q9UN67 800 aa17.13■□□□□ 0.33
CCDC40-206ENST00000572083 TGP01266 2768 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 CFAP73A6NFT4 308 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 HMGN4O00479 90 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 FAAHO00519 579 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 MSMBP08118 114 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 UQCRBP14927 111 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 CHI3L1P36222 383 aaPredicted RBP17.12■□□□□ 0.33
CCDC40-206ENST00000572083 HILS1P60008 231 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 SCGB2A2Q13296 93 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 DAG1Q14118 895 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 SYPL1Q16563 259 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 ELFN2Q5R3F8 820 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 MRPL2Q5T653 305 aaKnown RBP17.12■□□□□ 0.33
CCDC40-206ENST00000572083 PRAMEF8Q5VWM4 474 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 PRAMEF7Q5VXH5 474 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 EPHX4Q8IUS5 362 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 CMIPQ8IY22 773 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 IFT20Q8IY31 132 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 FAM169BQ8N8A8 192 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 ANKFN1Q8N957 763 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 OR8J2Q8NGG1 315 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 NEURL3Q96EH8 262 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 LRRC37BQ96QE4 947 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 TAPBPLQ9BX59 468 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 SLC38A1Q9H2H9 487 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 NOX3Q9HBY0 568 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 MOV10Q9HCE1 1003 aaKnown RBP17.12■□□□□ 0.33
CCDC40-206ENST00000572083 NOP53Q9NZM5 478 aaKnown RBP17.12■□□□□ 0.33
CCDC40-206ENST00000572083 MARCOQ9UEW3 520 aaPredicted RBP17.12■□□□□ 0.33
CCDC40-206ENST00000572083 GRIP1Q9Y3R0 1128 aa17.12■□□□□ 0.33
CCDC40-206ENST00000572083 AGAP5A6NIR3 686 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 TRIM77I1YAP6 450 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 WNT9BO14905 357 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 FRS3O43559 492 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 CHRM4P08173 479 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 SAGP10523 405 aaPredicted RBP17.11■□□□□ 0.33
CCDC40-206ENST00000572083 CBR1P16152 277 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 GPR6P46095 362 aaPredicted RBP17.11■□□□□ 0.33
CCDC40-206ENST00000572083 SH3BGRP55822 239 aaPredicted RBP17.11■□□□□ 0.33
CCDC40-206ENST00000572083 ARF1P84077 181 aaKnown RBP17.11■□□□□ 0.33
CCDC40-206ENST00000572083 MAD2L1Q13257 205 aaPredicted RBP17.11■□□□□ 0.33
CCDC40-206ENST00000572083 MSMPQ1L6U9 139 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 MDP1Q86V88 176 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 PPP1R36Q96LQ0 422 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 SLC35A5Q9BS91 424 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 CRLF2Q9HC73 371 aa17.11■□□□□ 0.33
CCDC40-206ENST00000572083 SEC14L2O76054 403 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 GKN3PP0CG01 181 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 CREB1P16220 341 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 IL7RP16871 459 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 TCN1P20061 433 aaPredicted RBP17.1■□□□□ 0.33
CCDC40-206ENST00000572083 EPHA1P21709 976 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 CAPZA2P47755 286 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 EMX2Q04743 252 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 FAHD2BQ6P2I3 314 aaPredicted RBP17.1■□□□□ 0.33
CCDC40-206ENST00000572083 UBLCP1Q8WVY7 318 aaPredicted RBP17.1■□□□□ 0.33
CCDC40-206ENST00000572083 FAHD2AQ96GK7 314 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 APOPT1Q96IL0 206 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 TRNT1Q96Q11 434 aaKnown RBP17.1■□□□□ 0.33
CCDC40-206ENST00000572083 MRPL37Q9BZE1 423 aaKnown RBP17.1■□□□□ 0.33
CCDC40-206ENST00000572083 LINC00470Q9BZP3 86 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 RLIMQ9NVW2 624 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 TREM2Q9NZC2 230 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 USP22Q9UPT9 525 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 CMAHPQ9Y471 501 aa17.1■□□□□ 0.33
CCDC40-206ENST00000572083 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
CCDC40-206ENST00000572083 TMEM229AB2RXF0 380 aa17.09■□□□□ 0.33
CCDC40-206ENST00000572083 M0R233 179 aa17.09■□□□□ 0.33
CCDC40-206ENST00000572083 SYNGR3O43761 229 aa17.09■□□□□ 0.33
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