RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 POU3F1Q03052 451 aaPredicted RBP6.08□□□□□ -1.44
SMG6-205ENST00000570659 ZNF154Q13106 437 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 TP53BP2Q13625 1128 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 OR7A5Q15622 319 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 FAM189A2Q15884 450 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 DEFB112Q30KQ8 113 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 C3orf36Q3SXR2 165 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 VPS26BQ4G0F5 336 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 TEX35Q5T0J7 233 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 LIPMQ5VYY2 423 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 OLFML2AQ68BL7 652 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 TYW3Q6IPR3 259 aaKnown RBP6.08□□□□□ -1.44
SMG6-205ENST00000570659 NIPAL3Q6P499 406 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 PAQR6Q6TCH4 344 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 BRD3OSQ6XYD6 125 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 CREB3L2Q70SY1 520 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 TRIM46Q7Z4K8 759 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 KRTCAP2Q8N6L1 136 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 SYT14Q8NB59 555 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 MAGEE2Q8TD90 523 aaPredicted RBP6.08□□□□□ -1.44
SMG6-205ENST00000570659 PPCDCQ96CD2 204 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 ITPKCQ96DU7 683 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 ANKRD27Q96NW4 1050 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 KCNS3Q9BQ31 491 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 RSPO3Q9BXY4 272 aaPredicted RBP6.08□□□□□ -1.44
SMG6-205ENST00000570659 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
SMG6-205ENST00000570659 OR51B6Q9H340 312 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 REEP4Q9H6H4 257 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 GPR35Q9HC97 309 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 MID1IP1Q9NPA3 183 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 SLC6A13Q9NSD5 602 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 NMRK1Q9NWW6 199 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 NINJ2Q9NZG7 142 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 B3GAT1Q9P2W7 334 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 RCE1Q9Y256 329 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 TMED7Q9Y3B3 224 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 HDGFL3Q9Y3E1 203 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 CMAHPQ9Y471 501 aa6.08□□□□□ -1.44
SMG6-205ENST00000570659 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 AQP7P3A6NL99 342 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 TMEM233B4DJY2 109 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 ZNF587BE7ETH6 402 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 EIF3HO15372 352 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMG6-205ENST00000570659 TBX19O60806 448 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 PRG2P13727 222 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 ATP6V1C1P21283 382 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 FPR2P25090 351 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 GCAP28676 217 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 TACR3P29371 465 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 APOBEC1P41238 236 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 PLTPP55058 493 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 PROK1P58294 105 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 UBE2NP61088 152 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 PAX2Q02962 417 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 TGFBR3Q03167 851 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 TSTQ16762 297 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 TSNAXIP1Q2TAA8 658 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 CEACAM16Q2WEN9 425 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 OXLD1Q5BKU9 147 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 RUSC1-AS1Q66K80 236 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 KLC3Q6P597 504 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 C16orf87Q6PH81 154 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 FIP1L1Q6UN15 594 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 UGT2A3Q6UWM9 527 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 FRRS1Q6ZNA5 592 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 USP51Q70EK9 711 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 GPAT4Q86UL3 456 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 LRRC8AQ8IWT6 810 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 CLECL1Q8IZS7 167 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 FAM169BQ8N8A8 192 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 POMGNT2Q8NAT1 580 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 LINC01006Q8NI28 216 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 SLC25A43Q8WUT9 341 aaPredicted RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 DCAKDQ8WVC6 231 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 RAB8BQ92930 207 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 MRPL57Q9BQC6 102 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 ERP44Q9BS26 406 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 NMUR2Q9GZQ4 415 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 ZNF350Q9GZX5 532 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 OBP2BQ9NPH6 170 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 DUSP13Q9UII6 198 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 PURGQ9UJV8 347 aaKnown RBP6.07□□□□□ -1.44
SMG6-205ENST00000570659 TRAPPC4Q9Y296 219 aa6.07□□□□□ -1.44
SMG6-205ENST00000570659 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 FAM187AA6NFU0 413 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 C17orf100A8MU93 164 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 G3V2L1 256 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 CCDC188H7C350 402 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 M0QZ24 198 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 PIP5K1BO14986 540 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 FRS3O43559 492 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 DNPH1O43598 174 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 SEC22BO75396 215 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 HPRP00739 348 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 PLATP00750 562 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 FAM157BP0CG42 384 aa6.06□□□□□ -1.44
SMG6-205ENST00000570659 HLA-DOBP13765 273 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms