RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FAM220BPB1ANY3 271 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 CCDC22O60826 627 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 VAMP5O95183 116 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 PLAUP00749 431 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 GGT1P19440 569 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 PTNP21246 168 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 SEC24CP53992 1094 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 CDH12P55289 794 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 STK11Q15831 433 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 ACKR1Q16570 336 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 NCMAPQ5T1S8 102 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 TSPO2Q5TGU0 170 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 TMEM225Q6GV28 225 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF613Q6PF04 617 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 TSPYL5Q86VY4 417 aaPredicted RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 EPHX4Q8IUS5 362 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 VANGL1Q8TAA9 524 aaPredicted RBP11.48□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF583Q96ND8 569 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 MCHR1Q99705 422 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 AMBRA1Q9C0C7 1298 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 SELENONQ9NZV5 590 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 RASD1Q9Y272 281 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 DSCAMO60469 2012 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 F8P00451 2351 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 HIVEP1P15822 2718 aa11.48□□□□□ -0.57
CNOT1-220ENST00000569916 CPSF4LA6NMK7 179 aaKnown RBP11.47□□□□□ -0.57
CNOT1-220ENST00000569916 M0R082 166 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 AIM2O14862 343 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 CHP2O43745 196 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 OR2T1O43869 369 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 THY1P04216 161 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 COX4I1P13073 169 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 GTF2E2P29084 291 aaKnown RBP11.47□□□□□ -0.57
CNOT1-220ENST00000569916 GRPRP30550 384 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 VEZF1Q14119 521 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 PPA1Q15181 289 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 GABRA6Q16445 453 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 ENTPD8Q5MY95 495 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 AAED1Q7RTV5 226 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 P2RY8Q86VZ1 359 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 TREML1Q86YW5 311 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 KDM8Q8N371 416 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 OR6S1Q8NH40 331 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF417Q8TAU3 575 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 SLC26A7Q8TE54 656 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 RASSF5Q8WWW0 418 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 ZNF587Q96SQ5 575 aaPredicted RBP11.47□□□□□ -0.57
CNOT1-220ENST00000569916 ELAC2Q9BQ52 826 aaKnown RBP11.47□□□□□ -0.57
CNOT1-220ENST00000569916 TMEM43Q9BTV4 400 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 PCDHAC1Q9H158 963 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 SLCO5A1Q9H2Y9 848 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 NGBQ9NPG2 151 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 BEX4Q9NWD9 120 aaPredicted RBP11.47□□□□□ -0.57
CNOT1-220ENST00000569916 NPAP1Q9NZP6 1156 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 UPB1Q9UBR1 384 aa11.47□□□□□ -0.57
CNOT1-220ENST00000569916 CIB4A0PJX0 185 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 DPRXA6NFQ7 191 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 LYPD3O95274 346 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 BGLAPP02818 100 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 SELENOPP49908 381 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 LTBQ06643 244 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 BSPH1Q075Z2 132 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 C9orf135Q5VTT2 229 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 WDR88Q6ZMY6 472 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 C20orf204Q6ZNR8 217 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 SSX8Q7RTT4 187 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 ADPRHL1Q8NDY3 354 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 ADAMTS16Q8TE57 1224 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 IGFBPL1Q8WX77 278 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 SLC41A3Q96GZ6 507 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 MUS81Q96NY9 551 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 EPYCQ99645 322 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 PIP5K1AQ99755 562 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 MYLK2Q9H1R3 596 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 ESRP2Q9H6T0 727 aaKnown RBP11.46□□□□□ -0.57
CNOT1-220ENST00000569916 CMTM6Q9NX76 183 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 B3GALT5Q9Y2C3 310 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.57
CNOT1-220ENST00000569916 MED13LQ71F56 2210 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 A0A1W2PR80 420 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 TRAPPC13A5PLN9 417 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 HS3ST1O14792 307 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 CLOCKO15516 846 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 CD3EP07766 207 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 TNFRSF1BP20333 461 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 DRD4P21917 467 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms