RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FKBP10Q96AY3 582 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 NSUN5Q96P11 429 aaKnown RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 SIGLEC11Q96RL6 698 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 DGCR6LQ9BY27 220 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 PITPNM3Q9BZ71 974 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 OR6C3Q9NZP0 311 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 TMEM216Q9P0N5 145 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 DKKL1Q9UK85 242 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 A0A0C4DFX4 3053 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SLC5A10A0PJK1 596 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 RFPL4AA6NLU0 287 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 RFPL4AL1F8VTS6 287 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 EIF3GO75821 320 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMG1-217ENST00000569764 UTS2O95399 124 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CD160O95971 181 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 RAF1P04049 648 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 NR2F6P10588 404 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 MMP15P51511 669 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CTBP2P56545 445 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 VLDLRP98155 873 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 POU4F1Q01851 419 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MAVSQ7Z434 540 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 LDB1Q86U70 411 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 GCNT2Q8N0V5 402 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 WDSUB1Q8N9V3 476 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 LMNTD1Q8N9Z9 388 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 OR5T2Q8NGG2 359 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 BAHD1Q8TBE0 780 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 WFDC5Q8TCV5 224 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ERGIC1Q969X5 290 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CHRDL1Q9BU40 450 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CLEC4MQ9H2X3 399 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 AUNIPQ9H7T9 357 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 LPAR2Q9HBW0 351 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 EML4Q9HC35 981 aaKnown RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 SERHLQ9NQF3 203 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 FBXO6Q9NRD1 293 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 ACOT9Q9Y305 439 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 UBE2J1Q9Y385 318 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 KCNMB2Q9Y691 235 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MYO10Q9HD67 2058 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SPAG17Q6Q759 2223 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SPTBN2O15020 2390 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ATG2AQ2TAZ0 1938 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 OR51F1A6NGY5 319 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 METTL15A6NJ78 407 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SULT1C2O00338 296 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SLC16A8O95907 504 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 FUCA1P04066 466 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 RPLP1P05386 114 aaKnown RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 COX4I1P13073 169 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 NPPBP16860 134 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 EMP3P54852 163 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MAZP56270 477 aaKnown RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 ITGADQ13349 1161 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 FZD2Q14332 565 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MEP1AQ16819 746 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 PTPRNQ16849 979 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ATAD3CQ5T2N8 411 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 DHRS7BQ6IAN0 325 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 NAPRTQ6XQN6 538 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 DET1Q7L5Y6 550 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SLC22A16Q86VW1 577 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 GPALPP1Q8IXQ4 340 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 PARP8Q8N3A8 854 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 OR13C5Q8NGS8 318 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ARRDC2Q8TBH0 407 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 VOPP1Q96AW1 172 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MTBPQ96DY7 904 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SLC46A1Q96NT5 459 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CTDSP1Q9GZU7 261 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 SEMA6CQ9H3T2 930 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 KCNJ16Q9NPI9 418 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 OR2S2Q9NQN1 319 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 ACSS1Q9NUB1 689 aaPredicted RBP6.11□□□□□ -1.43
SMG1-217ENST00000569764 ZNF224Q9NZL3 707 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 PRODH2Q9UF12 536 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 MAGEL2Q9UJ55 1249 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CLEC4EQ9ULY5 219 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 CABIN1Q9Y6J0 2220 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 GBF1Q92538 1859 aa6.11□□□□□ -1.43
SMG1-217ENST00000569764 I3L521 148 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 SLC16A5O15375 505 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 CTNSO60931 367 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 ANGPTL1O95841 491 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PIRTP0C851 137 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PGAM1P18669 254 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 OR1D5P58170 312 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PFN3P60673 137 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 NCALDP61601 193 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 KRR1Q13601 381 aaKnown RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 ENPP2Q13822 863 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 PPP1R3AQ16821 1122 aa6.1□□□□□ -1.43
SMG1-217ENST00000569764 B3GNTL1Q67FW5 361 aaPredicted RBP6.1□□□□□ -1.43
SMG1-217ENST00000569764 COLCA1Q6ZS62 124 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms