RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 VAMP5O95183 116 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 SELENOPP49908 381 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 GZMMP51124 257 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 KLF10Q13118 480 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 ZNF672Q499Z4 452 aaPredicted RBP17.7■□□□□ 0.42
ABCA3-206ENST00000569062 FAM91A1Q658Y4 838 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 ULK3Q6PHR2 472 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 EPHX4Q8IUS5 362 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 RNF217Q8TC41 542 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 TMEM171Q8WVE6 324 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 SLC38A4Q969I6 547 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 AMBRA1Q9C0C7 1298 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 SLCO5A1Q9H2Y9 848 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 GSX1Q9H4S2 264 aaPredicted RBP17.7■□□□□ 0.42
ABCA3-206ENST00000569062 PIF1Q9H611 641 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 SAR1AQ9NR31 198 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 LAMP3Q9UQV4 416 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 RASD1Q9Y272 281 aa17.7■□□□□ 0.42
ABCA3-206ENST00000569062 A0A0B4J2E0 115 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 A0A1B0GX12 115 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 M0R3H8 397 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 LGI1O95970 557 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 PTNP21246 168 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 CBLP22681 906 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 GTF2E2P29084 291 aaKnown RBP17.69■□□□□ 0.42
ABCA3-206ENST00000569062 PTH2RP49190 550 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 LGALS3BPQ08380 585 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 TRMT5Q32P41 509 aaKnown RBP17.69■□□□□ 0.42
ABCA3-206ENST00000569062 OR7E24Q6IFN5 339 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 NANOGP8Q6NSW7 305 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 SSX8Q7RTT4 187 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 GPR32P1Q8NGA4 272 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 FBXW5Q969U6 566 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 SLC47A1Q96FL8 570 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 ARHGDIGQ99819 225 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 GSX2Q9BZM3 304 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 NANOGQ9H9S0 305 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 TMEM27Q9HBJ8 222 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 MTORP42345 2549 aa17.69■□□□□ 0.42
ABCA3-206ENST00000569062 A0A087WUJ7 227 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 SHISA9B4DS77 424 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 ABCD4O14678 606 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 FZD7O75084 574 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 SOD3P08294 240 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 DANCRP0C864 163 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 MPGP29372 298 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 PCGF2P35227 344 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 ZNF83P51522 516 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 SLC25A3Q00325 362 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 CYLC2Q14093 348 aaPredicted RBP17.68■□□□□ 0.42
ABCA3-206ENST00000569062 RABL3Q5HYI8 236 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 FAM69AQ5T7M9 428 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 REP15Q6BDI9 236 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 NIPAL3Q6P499 406 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 YTHDF3Q7Z739 585 aaKnown RBP17.68■□□□□ 0.42
ABCA3-206ENST00000569062 RANBP3LQ86VV4 465 aaPredicted RBP17.68■□□□□ 0.42
ABCA3-206ENST00000569062 WDR31Q8NA23 367 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 POMGNT2Q8NAT1 580 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 LRRC58Q96CX6 371 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 Q96MF0 132 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 C1QTNF6Q9BXI9 259 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 CCDC134Q9H6E4 229 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 B3GAT1Q9P2W7 334 aa17.68■□□□□ 0.42
ABCA3-206ENST00000569062 SETD2Q9BYW2 2564 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 TRAV36DV7A0A075B6V5 113 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 M0R082 166 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 FXYD1O00168 92 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 OR2T1O43869 369 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 FOSL1P15407 271 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 CDH2P19022 906 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 GRPRP30550 384 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 CDH12P55289 794 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 RIPPLY3P57055 190 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 SPOCK1Q08629 439 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 NPTX1Q15818 432 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 NRF1Q16656 503 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 MMEL1Q495T6 779 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 C5orf46Q6UWT4 87 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 PRSS57Q6UWY2 283 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 RBM45Q8IUH3 476 aaKnown RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 C1orf162Q8NEQ5 155 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 OR4D11Q8NGI4 311 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 OR6T1Q8NGN1 323 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 ZNF417Q8TAU3 575 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 SMAP2Q8WU79 429 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 TAMM41Q96BW9 452 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 ZNF587Q96SQ5 575 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 MCHR1Q99705 422 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 SMR3AQ99954 134 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 CXorf56Q9H5V9 222 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 EVA1AQ9H8M9 152 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 SLC17A5Q9NRA2 495 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 ZNF701Q9NV72 531 aaPredicted RBP17.67■□□□□ 0.42
ABCA3-206ENST00000569062 SELENONQ9NZV5 590 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 KLHL14Q9P2G3 628 aa17.67■□□□□ 0.42
ABCA3-206ENST00000569062 USF3Q68DE3 2245 aa17.66■□□□□ 0.42
ABCA3-206ENST00000569062 LOC100653049A0A140TA62 436 aa17.66■□□□□ 0.42
ABCA3-206ENST00000569062 M0R1B8 84 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms