RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PLEK2Q9NYT0 353 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 TECRQ9NZ01 308 aaKnown RBP2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 C6orf203Q9P0P8 240 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 EPHA6Q9UF33 1036 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 APOBEC3BQ9UH17 382 aaKnown RBP2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 LCMT1Q9UIC8 334 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 TEKT2Q9UIF3 430 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 STOML2Q9UJZ1 356 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 PLCL2Q9UPR0 1127 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 PPP2R2CQ9Y2T4 447 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLHDC2Q9Y2U9 406 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 USP9XQ93008 2570 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 ICE1Q9Y2F5 2266 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 SHANK1Q9Y566 2161 aa2.8□□□□□ -1.96
HMGB1P6-201ENST00000569046 FBN2P35556 2912 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PDZD2O15018 2839 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 A0A0D9SEW6 157 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 A0A0J9YWU9 116 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 A0A0U1RQS6 177 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 METTL21EPA6NDL7 271 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR52A4PA6NMU1 304 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 EFCAB7A8K855 629 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 A8MX80 341 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 D6RAR5 112 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NPIPA2E9PIF3 369 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PPIAL4DF5H284 164 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 L7N2F9 121 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NVLO15381 856 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 B4GAT1O43505 415 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NDUFA7O95182 113 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 IGLV3-27P01718 113 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CAPN1P07384 714 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 APRTP07741 180 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 GSTA2P09210 222 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 HIST1H2AGP0C0S8 130 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CTSEP14091 401 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 GP9P14770 177 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CPN1P15169 458 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 GPX3P22352 226 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 F8A1P23610 371 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 UGT1A3P35503 534 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CYLC1P35663 651 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ACADSBP45954 432 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 FNTAP49354 379 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PPT1P50897 306 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 SUCLG1P53597 346 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ATP5IP56385 69 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NAAAQ02083 359 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TGM3Q08188 693 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 INCA1Q0VD86 236 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 HSPA14Q0VDF9 509 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PJVKQ0ZLH3 352 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 BST1Q10588 318 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 EXOSC2Q13868 293 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ELAVL3Q14576 367 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 MEF2DQ14814 521 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR1C1Q15619 314 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CLPPQ16740 277 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 KNOP1Q1ED39 458 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 LRRC37A5PQ49AS3 106 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 BCL7AQ4VC05 210 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF311Q5JNZ3 666 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 RTL6Q6ICC9 239 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC27A4Q6P1M0 643 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF613Q6PF04 617 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM207Q6UWW9 146 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 Q6ZRP5 223 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 STXBP4Q6ZWJ1 553 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TIPARPQ7Z3E1 657 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 C16orf62Q7Z3J2 963 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TAC4Q86UU9 113 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PARGQ86W56 976 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PSTKQ8IV42 348 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 IQCF2Q8IXL9 164 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF440Q8IYI8 595 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ARHGAP18Q8N392 663 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANKFN1Q8N957 763 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR5AP2Q8NGF4 316 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR13C5Q8NGS8 318 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR2A12Q8NGT7 310 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 GPR148Q8TDV2 347 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 PATE1Q8WXA2 126 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 STARD8Q92502 1023 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 EMG1Q92979 244 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 ART4Q93070 314 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 HIST1H2ACQ93077 130 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 C19orf60Q96EN9 201 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 C10orf90Q96M02 699 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 VSTM2LQ96N03 204 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 RBM14Q96PK6 669 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 NEDD4LQ96PU5 975 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 USP28Q96RU2 1077 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLF6Q99612 283 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 FEM1AQ9BSK4 669 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM43Q9BTV4 400 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 CABLES2Q9BTV7 478 aa2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 WRAP53Q9BUR4 548 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 MCRIP2Q9BUT9 160 aaKnown RBP2.79□□□□□ -1.96
HMGB1P6-201ENST00000569046 RBM24Q9BX46 236 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms