RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	CREB3L2	Q70SY1	520 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ANKRD46	Q86W74	232 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	PEX5L	Q8IYB4	626 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	TCP10L	Q8TDR4	215 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ZMYND19	Q96E35	227 aa	Predicted RBP	13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	DOK1	Q99704	481 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	SLC17A7	Q9P2U7	560 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	BTNL2	Q9UIR0	455 aa		13.66	□□□□□ -0.22
HERPUD1-215	ENST00000568676	PRAMEF27	A3QJZ7	478 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676		B4DSR2	109 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	RPL36A-HNRNPH2	H7BZ11	118 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	CBR1	P16152	277 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ARR3	P36575	388 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	RIN1	Q13671	783 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	WBP2NL	Q6ICG8	309 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	GSPT2	Q8IYD1	628 aa	Known RBP	13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	UBASH3B	Q8TF42	649 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	CCDC115	Q96NT0	180 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	AKTIP	Q9H8T0	292 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	DYNLRB1	Q9NP97	96 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ADPRHL2	Q9NX46	363 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	RCE1	Q9Y256	329 aa		13.65	□□□□□ -0.22
HERPUD1-215	ENST00000568676	TLDC2	A0PJX2	215 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676		E9PBE3	544 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	BPGM	P07738	259 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	TFPT	P0C1Z6	253 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	MYZAP	P0CAP1	466 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NR2F1	P10589	423 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	IFNGR1	P15260	489 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CFP	P27918	469 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CALCR	P30988	508 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	S100A3	P33764	101 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	EVX1	P49640	407 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SELENOP	P49908	381 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	P2RY4	P51582	365 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SYPL1	Q16563	259 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	PRAMEF8	Q5VWM4	474 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	PRAMEF7	Q5VXH5	474 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NIPAL3	Q6P499	406 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SPATA21	Q7Z572	469 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	HMGN2P46	Q86SG4	172 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	RNF130	Q86XS8	419 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	TEX29	Q8N6K0	151 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	ANKFN1	Q8N957	763 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SNX18	Q96RF0	628 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	PLA2G12A	Q9BZM1	189 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CALML5	Q9NZT1	146 aa		13.64	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CDHR4	A6H8M9	788 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	FRS3	O43559	492 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SPRY1	O43609	319 aa	Predicted RBP	13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CHRM4	P08173	479 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	THBS4	P35443	961 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	ROR2	Q01974	943 aa	Known RBP	13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	HGFAC	Q04756	655 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	ADRM1	Q16186	407 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	PDCD2	Q16342	344 aa	Predicted RBP	13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	LIN52	Q52LA3	116 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SPANXN4	Q5MJ08	99 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	C1orf140	Q5VVS0	124 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	REP15	Q6BDI9	236 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	GLCCI1	Q86VQ1	547 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SVOPL	Q8N434	492 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	MFSD8	Q8NHS3	518 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	STK35	Q8TDR2	534 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CKAP2	Q8WWK9	683 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	PANX1	Q96RD7	426 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NELFA	Q9H3P2	528 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	MS4A5	Q9H3V2	200 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	OCEL1	Q9H607	264 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	ARMC7	Q9H6L4	198 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	LGALS13	Q9UHV8	139 aa		13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.63	□□□□□ -0.23
HERPUD1-215	ENST00000568676		A0A096LPE4	126 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676		A0A1W2PPZ6	126 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CCDC154	A6NI56	674 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NR5A2	O00482	541 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NPIPB7	O75200	414 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SPAG7	O75391	227 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	UPK3A	O75631	287 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	ZNF43	P17038	809 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	IL2RG	P31785	369 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	COMP	P49747	757 aa	Predicted RBP	13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	FAM174B	Q3ZCQ3	159 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SLC9B1	Q4ZJI4	515 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	RNF220	Q5VTB9	566 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	EPHX4	Q8IUS5	362 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	NUDCD3	Q8IVD9	361 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SGMS2	Q8NHU3	365 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	USP22	Q9UPT9	525 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	CMAHP	Q9Y471	501 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SPEF1	Q9Y4P9	236 aa		13.62	□□□□□ -0.23
HERPUD1-215	ENST00000568676	TMEM129	A0AVI4	362 aa		13.61	□□□□□ -0.23
HERPUD1-215	ENST00000568676	AKAP8	O43823	692 aa	Known RBP	13.61	□□□□□ -0.23
HERPUD1-215	ENST00000568676	SLC43A1	O75387	559 aa		13.61	□□□□□ -0.23
HERPUD1-215	ENST00000568676	AHSA1	O95433	338 aa		13.61	□□□□□ -0.23
HERPUD1-215	ENST00000568676	KRT75	O95678	551 aa		13.61	□□□□□ -0.23
HERPUD1-215	ENST00000568676	TF	P02787	698 aa		13.61	□□□□□ -0.23

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