RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FKRPQ9H9S5 495 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF229Q9UJW7 825 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 PCDHGB7Q9Y5F8 929 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 VSTM2BA6NLU5 285 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 SERPINI2O75830 405 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 GP1BBP13224 206 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 F8A1P23610 371 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 SDHAP31040 664 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 NAA10P41227 235 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-211ENST00000568373 RANBP1P43487 201 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 RPS5P46782 204 aaKnown RBP16.49■□□□□ 0.23
SMPD3-211ENST00000568373 P2RX1P51575 399 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 HCCSP53701 268 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 CTXN1P60606 82 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ACTA2P62736 377 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ACTG2P63267 376 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 E2F1Q01094 437 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 RPL18Q07020 188 aaKnown RBP16.49■□□□□ 0.23
SMPD3-211ENST00000568373 CDC20Q12834 499 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 TRAM1Q15629 374 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 LEG1Q6P5S2 330 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 NANOGNBQ7Z5D8 188 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 C1orf210Q8IVY1 113 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 SLC35F2Q8IXU6 374 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 OR5J2Q8NH18 312 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 PPIEQ9UNP9 301 aaKnown RBP16.49■□□□□ 0.23
SMPD3-211ENST00000568373 NPFFR2Q9Y5X5 522 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 PCNX3Q9H6A9 2034 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 PATE3B3GLJ2 98 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 DVL2O14641 736 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 PTTG1O95997 202 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 PYCR1P32322 319 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 CDKN2AP42771 156 aaKnown RBP16.48■□□□□ 0.23
SMPD3-211ENST00000568373 EMP2P54851 167 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 SIGLEC14Q08ET2 396 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF79Q15937 498 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 PHF19Q5T6S3 580 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 C16orf47Q6ZP98 133 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-211ENST00000568373 JAZF1Q86VZ6 243 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 SYS1Q8N2H4 156 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 LSM14AQ8ND56 463 aaKnown RBP16.48■□□□□ 0.23
SMPD3-211ENST00000568373 ZC3H10Q96K80 434 aaKnown RBP16.48■□□□□ 0.23
SMPD3-211ENST00000568373 CPNE5Q9HCH3 593 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 APMAPQ9HDC9 416 aa16.48■□□□□ 0.23
SMPD3-211ENST00000568373 TXNDC12O95881 172 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 HIST1H2ABP04908 130 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 F13BP05160 661 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 SLC3A1Q07837 685 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 EFR3AQ14156 821 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 DMKNQ6E0U4 476 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 PAPD4Q6PIY7 484 aaKnown RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 POMZP3Q6PJE2 187 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 RPTNQ6XPR3 784 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 HIST3H2AQ7L7L0 130 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 EGFL6Q8IUX8 553 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 OR6K6Q8NGW6 343 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 NUBPLQ8TB37 319 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 HIST1H2ACQ93077 130 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 NDEL1Q9GZM8 345 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 C14orf119Q9NWQ9 140 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 TECTAO75443 2155 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 TRAV36DV7A0A075B6V5 113 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 ADAM10O14672 748 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 GLCEO94923 617 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 HOXD12P35452 270 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 MTNR1BP49286 362 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 SLC25A1P53007 311 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 SLC26A5P58743 744 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 DEFA1P59665 94 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 DEFA3P59666 94 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 DAB2P98082 770 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 KRR1Q13601 381 aaKnown RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 QPRTQ15274 297 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 GLYR1Q49A26 553 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 CDONQ4KMG0 1287 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 TP53I3Q53FA7 332 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 EMC4Q5J8M3 183 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 AGAP7PQ5VUJ5 663 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 NLGN4YQ8NFZ3 816 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 PGLYRP3Q96LB9 341 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 WDR77Q9BQA1 342 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 TTTY10Q9BZA0 68 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 SRRQ9GZT4 340 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 RPRD1BQ9NQG5 326 aaKnown RBP16.47■□□□□ 0.23
SMPD3-211ENST00000568373 OCIAD1Q9NX40 245 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 EXPH5Q8NEV8 1989 aa16.47■□□□□ 0.23
SMPD3-211ENST00000568373 C4orf47A7E2U8 309 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 SELENOFO60613 162 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 SLC25A12O75746 678 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 NCR1O76036 304 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 CER1O95813 267 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 BGLAPP02818 100 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
SMPD3-211ENST00000568373 POLR2HP52434 150 aaKnown RBP16.46■□□□□ 0.23
SMPD3-211ENST00000568373 CLPPQ16740 277 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-211ENST00000568373 ZMAT1Q5H9K5 638 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 LINC01590Q5TEZ4 76 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 MISPQ8IVT2 679 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 OR8H2Q8N162 312 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms