RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SPATA9Q9BWV2 254 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 WDR55Q9H6Y2 383 aaPredicted RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 TPT1P8Q9HAU6 139 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 ADPRHL2Q9NX46 363 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 A0A1W2PR80 420 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 C5orf58C9J3I9 102 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 NDUFS8O00217 210 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 NDUFS7O75251 213 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 SNNO75324 88 aaPredicted RBP16.3■□□□□ 0.2
LINC01238-205ENST00000567549 AKR7A3O95154 331 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 TFPTP0C1Z6 253 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 KITP10721 976 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 IL12AP29459 219 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 FADDQ13158 208 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 C3orf36Q3SXR2 165 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 COX20Q5RI15 118 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 C9orf135Q5VTT2 229 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 C1orf140Q5VVS0 124 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF836Q6ZNA1 936 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 MIER2Q8N344 545 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 TMEM99Q8N816 258 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 MGARPQ8TDB4 240 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 CKAP2Q8WWK9 683 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 MANSC1Q9H8J5 431 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 SDR39U1Q9NRG7 319 aaPredicted RBP16.3■□□□□ 0.2
LINC01238-205ENST00000567549 TMEM160Q9NX00 188 aa16.3■□□□□ 0.2
LINC01238-205ENST00000567549 OR2T1O43869 369 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 POLR2JP52435 117 aaKnown RBP16.29■□□□□ 0.2
LINC01238-205ENST00000567549 VLDLRP98155 873 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 PLAURQ03405 335 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 SPOCK1Q08629 439 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 TMEM249Q2WGJ8 235 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF311Q5JNZ3 666 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 VRK2Q86Y07 508 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 MFSD8Q8NHS3 518 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 BBS10Q8TAM1 723 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 SLC38A5Q8WUX1 472 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 AURKBQ96GD4 344 aaPredicted RBP16.29■□□□□ 0.2
LINC01238-205ENST00000567549 MAELQ96JY0 434 aaKnown RBP16.29■□□□□ 0.2
LINC01238-205ENST00000567549 MAGEB18Q96M61 343 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 MDFIQ99750 246 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 SPATA5L1Q9BVQ7 753 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 C1QTNF6Q9BXI9 259 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 RLIMQ9NVW2 624 aa16.29■□□□□ 0.2
LINC01238-205ENST00000567549 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
LINC01238-205ENST00000567549 IGHV4-30-2A0A087WSY4 118 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 FRS3O43559 492 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 PDE5AO76074 875 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 F12P00748 615 aaPredicted RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 VIMP08670 466 aaKnown RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 GKN3PP0CG01 181 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 ETFAP13804 333 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF43P17038 809 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 CDH2P19022 906 aaPredicted RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 PPIBP23284 216 aaKnown RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 NTF4P34130 210 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 PDLIM4P50479 330 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 WDR4P57081 412 aaKnown RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 MFSD13AQ14CX5 517 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 CYB5R2Q6BCY4 276 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 KRT73Q86Y46 540 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 CCDC36Q8IYA8 594 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF540Q8NDQ6 660 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 MAGEE2Q8TD90 523 aaPredicted RBP16.28■□□□□ 0.2
LINC01238-205ENST00000567549 TMEM158Q8WZ71 300 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 SLC38A2Q96QD8 506 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 LINC00470Q9BZP3 86 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 C12orf10Q9HB07 376 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 SELENONQ9NZV5 590 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 RCE1Q9Y256 329 aa16.28■□□□□ 0.2
LINC01238-205ENST00000567549 RTTNQ86VV8 2226 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 ARPC4-TTLL3A0A0A6YYG9 625 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 FAM157CP0CG43 387 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 PTNP21246 168 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 USF1P22415 310 aaPredicted RBP16.27■□□□□ 0.2
LINC01238-205ENST00000567549 ACAA2P42765 397 aaKnown RBP16.27■□□□□ 0.2
LINC01238-205ENST00000567549 GZMKP49863 264 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 NCALDP61601 193 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 C6orf52Q5T4I8 152 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 ANKRD16Q6P6B7 361 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 CREB3L2Q70SY1 520 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 NET1Q7Z628 596 aaPredicted RBP16.27■□□□□ 0.2
LINC01238-205ENST00000567549 FAM169BQ8N8A8 192 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 BHLHE22Q8NFJ8 381 aaPredicted RBP16.27■□□□□ 0.2
LINC01238-205ENST00000567549 OR4F15Q8NGB8 312 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 TMEM19Q96HH6 336 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF385AQ96PM9 386 aaKnown RBP16.27■□□□□ 0.2
LINC01238-205ENST00000567549 KCNK17Q96T54 332 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 PIMREGQ9BSJ6 248 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 EVA1AQ9H8M9 152 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 BCL2L10Q9HD36 194 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 CORO2BQ9UQ03 480 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 MOKQ9UQ07 419 aa16.27■□□□□ 0.2
LINC01238-205ENST00000567549 B9A039 149 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 ATP6V1G2-DDX39BF2Z307 99 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms