RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CD96P40200 585 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 ART1P52961 327 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 RPS15P62841 145 aaKnown RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 KREMEN2Q8NCW0 462 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 OR52E2Q8NGJ4 325 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 GINS4Q9BRT9 223 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 RAB11FIP5Q9BXF6 653 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 C14orf105Q9NVL8 296 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 FXYD6-FXYD2A0A087WZ82 144 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 ACOD1A6NK06 481 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 GLSO94925 669 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 SIX6O95475 246 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 PTHLHP12272 177 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 PSMB10P40306 273 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 DIO1P49895 249 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 RBMS2Q15434 407 aaKnown RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 TMEM240Q5SV17 173 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 RGP1Q92546 391 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 MRPL48Q96GC5 212 aaKnown RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF559Q9BR84 538 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 FXYD6Q9H0Q3 95 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 ZBP1Q9H171 429 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 RSPH9Q9H1X1 276 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-215ENST00000566843 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 FBXL21Q9UKT6 434 aa14.39□□□□□ -0.11
COMMD4-215ENST00000566843 CHURC1-FNTBB4DL54 471 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 TEX46H3BTG2 121 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 EGFP01133 1207 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 FCER2P06734 321 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 FAUP35544 74 aaKnown RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 NAA10P41227 235 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 CLDN12P56749 244 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 BTN3A2P78410 334 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 PLAURQ03405 335 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 STX4Q12846 297 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 DCST2Q5T1A1 773 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 SAMD14Q8IZD0 417 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF433Q8N7K0 673 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF426Q9BUY5 554 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 A0A0B4J2E0 115 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 A0A1B0GX12 115 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 CDC123O75794 336 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 GMFBP60983 142 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 PABPC1L2AQ5JQF8 200 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 GLB1L2Q8IW92 636 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 SDR9C7Q8NEX9 313 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 PXT1Q8NFP0 134 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 OR2L3Q8NG85 312 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 RNF166Q96A37 237 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 TMEM27Q9HBJ8 222 aa14.38□□□□□ -0.11
COMMD4-215ENST00000566843 USP36Q9P275 1121 aaKnown RBP14.38□□□□□ -0.11
COMMD4-215ENST00000566843 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 A0A1B0GW55 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 H7C417 338 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 PEX12O00623 359 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 APOC3P02656 99 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 PCCBP05166 539 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L2P0CJ85 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L3P0CJ86 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L4P0CJ87 422 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L5P0CJ88 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L6P0CJ89 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4L7P0CJ90 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 HIST1H1CP16403 213 aaKnown RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 MST1P26927 711 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 RBM34P42696 430 aaKnown RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DHCR24Q15392 516 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 HNRNPA1L2Q32P51 320 aaKnown RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DCAF12L2Q5VW00 463 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF425Q6IV72 752 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 MTSS1LQ765P7 747 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 SLC35F3Q8IY50 421 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DND1Q8IYX4 353 aaKnown RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 KCT2Q8NC54 265 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 ATOH1Q92858 354 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 COL26A1Q96A83 441 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 FBXO34Q9NWN3 711 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 DUX4Q9UBX2 424 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 MTFP1Q9UDX5 166 aa14.37□□□□□ -0.11
COMMD4-215ENST00000566843 C19orf53Q9UNZ5 99 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-215ENST00000566843 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 GOSR2O14653 212 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 IGF2P01344 180 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 PEBP1P30086 187 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 ERVFC1P60507 584 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 B2MP61769 119 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 LGALS3BPQ08380 585 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 MELKQ14680 651 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 OR4K14Q8NGD5 310 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 LILRB1Q8NHL6 650 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 PMM1Q92871 262 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 GAL3ST3Q96A11 431 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 FLRT3Q9NZU0 649 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 NPIPA5A0A0B4J1W7 369 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms