RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GRIN2AQ12879 1464 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ABCC2Q92887 1545 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SYNMO15061 1565 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 AK9Q5TCS8 1911 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ALKQ9UM73 1620 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CDK13Q14004 1512 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ATP10AO60312 1499 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 USP47Q96K76 1375 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 PLEKHH1Q9ULM0 1364 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 KCNE1BA0A087WTH5 132 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 IGHV2-70DA0A0C4DH43 119 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TRBV7-9A0A0J9YWB2 115 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 C1orf232A0A0U1RR37 186 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 GSTTP1A0A1W2PQM5 241 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TRABD2BA6NFA1 517 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 IGLON5A6NGN9 336 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 E9PQ18 207 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 RFXANKO14593 260 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TFECO14948 347 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CXCL13O43927 109 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 PRKYO43930 277 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 OR7A10O76100 309 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ERLIN2O94905 339 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 AP2A2O94973 939 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 NUDT14O95848 222 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CRYABP02511 175 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 HOXB7P09629 217 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 SERPINA2P20848 420 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 SYT1P21579 422 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 FASP25445 335 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ETV5P41161 510 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 GPR1P46091 355 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CX3CR1P49238 355 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 PRKXP51817 358 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CCNHP51946 323 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 LIM2P55344 173 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TMEM50BP56557 158 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 UBE2KP61086 200 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ATP6V0D1P61421 351 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPS22P82650 360 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 SRSF4Q08170 494 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ARL16Q0P5N6 197 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ORC2Q13416 577 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 KLF9Q13886 244 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 GRB7Q14451 532 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 MAPRE2Q15555 327 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 MLF2Q15773 248 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ISXQ2M1V0 245 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 C18orf21Q32NC0 220 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 PAGE2BQ5JRK9 111 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF470Q6ECI4 717 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 OR52E8Q6IFG1 317 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 Q6ZSR3 168 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TUBA1AQ71U36 451 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 FAM122BQ7Z309 247 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 STPG4Q8N801 248 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 C15orf54Q8N8G6 183 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF565Q8N9K5 539 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 DNAAF3Q8N9W5 541 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 GATSQ8NAP1 163 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CATSPER1Q8NEC5 780 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 OR52B6Q8NGF0 335 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 OR10G8Q8NGN5 311 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 OR2T6Q8NHC8 308 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 SORCS1Q8WY21 1168 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 NR4A3Q92570 626 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 NDRG1Q92597 394 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 STMN2Q93045 179 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 TOMM40LQ969M1 308 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 IL17FQ96PD4 163 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CYP2S1Q96SQ9 504 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 RBM4BQ9BQ04 359 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 MED10Q9BTT4 135 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 DGCR6LQ9BY27 220 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ACTR3CQ9C0K3 210 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 REEP4Q9H6H4 257 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ANKHQ9HCJ1 492 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 FGF20Q9NP95 211 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 ELOVL2Q9NXB9 296 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CLEC5AQ9NY25 188 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 EURLQ9NYK6 297 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 NUDT4Q9NZJ9 180 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 CACNA1AO00555 2505 aa2.8□□□□□ -1.96
HERPUD1-211ENST00000566550 POLA1P09884 1462 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 METP08581 1390 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 JCADQ9P266 1359 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 TRBV9A0A0B4J1U6 114 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 LY6G6EA0A0G2JKS1 128 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 IQCMA0A1B0GVH7 501 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 A0A1W2PRD5 423 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5B21A6NL26 309 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 RNF212BA8MTL3 300 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 IDSB3KWA1 339 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PRAC2D3DTV9 90 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 NPIPB9F8W1W9 429 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 BLOC1S5-TXNDC5H3BN57 136 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 GOLGA8RI6L899 631 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PLPP1O14494 284 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HSD17B6O14756 317 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ZBTB5O15062 677 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms