RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 EBF4Q9BQW3 602 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 SPATA5L1Q9BVQ7 753 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 C1QTNF6Q9BXI9 259 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 C12orf10Q9HB07 376 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 OBP2BQ9NPH6 170 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 SLC25A37Q9NYZ2 338 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 CCDC167Q9P0B6 97 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 RPS6KB2Q9UBS0 482 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 B3GALT5Q9Y2C3 310 aa17.68■□□□□ 0.42
CLN6-207ENST00000566347 ELOA3DA6NLF2 546 aaPredicted RBP17.67■□□□□ 0.42
CLN6-207ENST00000566347 ARAFP10398 606 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 GTF2E2P29084 291 aaKnown RBP17.67■□□□□ 0.42
CLN6-207ENST00000566347 FABP6P51161 128 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 AQP5P55064 265 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 ELOA3BQ3SY89 546 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 C11orf71Q6IPW1 123 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 REEP3Q6NUK4 255 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 CREB3L2Q70SY1 520 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 ELOA3Q8NG57 546 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 DYDC1Q8WWB3 177 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 CACNG6Q9BXT2 260 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 GDF2Q9UK05 429 aaPredicted RBP17.67■□□□□ 0.42
CLN6-207ENST00000566347 CORO2BQ9UQ03 480 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 GMEB1Q9Y692 573 aa17.67■□□□□ 0.42
CLN6-207ENST00000566347 ZNF587BE7ETH6 402 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 NDUFS7O75251 213 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 PAX7P23759 505 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 ATP4BP51164 291 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 SLC25A3Q00325 362 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 HOXC5Q00444 222 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 DMTNQ08495 405 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 C5orf46Q6UWT4 87 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 C6orf89Q6UWU4 347 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 B3GLCTQ6Y288 498 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 MSRB3Q8IXL7 192 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 LSMEM1Q8N8F7 131 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 NFKBIDQ8NI38 313 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 ATP23Q9Y6H3 246 aa17.66■□□□□ 0.42
CLN6-207ENST00000566347 FTCDNL1E5RQL4 147 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 TP53P04637 393 aaPredicted RBP17.65■□□□□ 0.42
CLN6-207ENST00000566347 PNMTP11086 282 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 BMP4P12644 408 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 CDH2P19022 906 aaPredicted RBP17.65■□□□□ 0.42
CLN6-207ENST00000566347 PTNP21246 168 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 RPS5P46782 204 aaKnown RBP17.65■□□□□ 0.42
CLN6-207ENST00000566347 SELENOPP49908 381 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 NUDT6P53370 316 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 CDK6Q00534 326 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 EGR4Q05215 589 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 KRTAP1-1Q07627 177 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 PAGE3Q5JUK9 113 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 DHRS4L2Q6PKH6 230 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 EPHX4Q8IUS5 362 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 MAPK1IP1LQ8NDC0 245 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 DNAJA4Q8WW22 397 aaPredicted RBP17.65■□□□□ 0.42
CLN6-207ENST00000566347 SLC25A36Q96CQ1 311 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 ZNF317Q96PQ6 595 aaPredicted RBP17.65■□□□□ 0.42
CLN6-207ENST00000566347 RHNO1Q9BSD3 238 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 PTDSS2Q9BVG9 487 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 TMEM38AQ9H6F2 299 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 SLC52A3Q9NQ40 469 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 VAPAQ9P0L0 249 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 SLAMF8Q9P0V8 285 aa17.65■□□□□ 0.42
CLN6-207ENST00000566347 ABCA1O95477 2261 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 CR1P17927 2039 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 EVPLLA8MZ36 301 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 OR2T1O43869 369 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 SSX4O60224 188 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 DSCR9P59020 149 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 SQLEQ14534 574 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 RAB35Q15286 201 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 HIKESHIQ53FT3 197 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 AGKQ53H12 422 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 NIPAL3Q6P499 406 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 BHLHE22Q8NFJ8 381 aaPredicted RBP17.64■□□□□ 0.41
CLN6-207ENST00000566347 OR1K1Q8NGR3 316 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 SLC38A4Q969I6 547 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 KTI12Q96EK9 354 aaPredicted RBP17.64■□□□□ 0.41
CLN6-207ENST00000566347 ZNF607Q96SK3 696 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 LINC00470Q9BZP3 86 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 RABEP2Q9H5N1 569 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 MOV10Q9HCE1 1003 aaKnown RBP17.64■□□□□ 0.41
CLN6-207ENST00000566347 RCE1Q9Y256 329 aa17.64■□□□□ 0.41
CLN6-207ENST00000566347 ALPK2Q86TB3 2170 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 TRBV5-3A0A0A0MS03 114 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 PRORSD1PA6NEY8 169 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 H7C417 338 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 FZD7O75084 574 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 LGI1O95970 557 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 ZNF43P17038 809 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 GPX2P18283 190 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 SLC6A2P23975 617 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 APOBEC3AP31941 199 aaPredicted RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 SH3BGRP55822 239 aaPredicted RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 UBE2NP61088 152 aaKnown RBP17.63■□□□□ 0.41
CLN6-207ENST00000566347 NCALDP61601 193 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 CHRNB3Q05901 458 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 TBRG1Q3YBR2 411 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 TTMPQ5BVD1 217 aa17.63■□□□□ 0.41
CLN6-207ENST00000566347 FAM69AQ5T7M9 428 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms