RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C11orf71Q6IPW1 123 aa2.56□□□□□ -2
UBR1-205ENST00000564540 IGFL1Q6UW32 110 aa2.56□□□□□ -2
UBR1-205ENST00000564540 CCDC73Q6ZRK6 1079 aa2.56□□□□□ -2
UBR1-205ENST00000564540 KIAA1328Q86T90 577 aa2.56□□□□□ -2
UBR1-205ENST00000564540 LYPD1Q8N2G4 141 aa2.56□□□□□ -2
UBR1-205ENST00000564540 OR10G2Q8NGC3 310 aa2.56□□□□□ -2
UBR1-205ENST00000564540 OR6C4Q8NGE1 309 aa2.56□□□□□ -2
UBR1-205ENST00000564540 SELENOIQ9C0D9 397 aa2.56□□□□□ -2
UBR1-205ENST00000564540 RHBGQ9H310 441 aa2.56□□□□□ -2
UBR1-205ENST00000564540 DMAP1Q9NPF5 467 aaPredicted RBP2.56□□□□□ -2
UBR1-205ENST00000564540 SLC25A37Q9NYZ2 338 aa2.56□□□□□ -2
UBR1-205ENST00000564540 DEC1Q9P2X7 70 aa2.56□□□□□ -2
UBR1-205ENST00000564540 GNPTGQ9UJJ9 305 aa2.56□□□□□ -2
UBR1-205ENST00000564540 ZNF835Q9Y2P0 537 aa2.56□□□□□ -2
UBR1-205ENST00000564540 CLSPNQ9HAW4 1339 aa2.56□□□□□ -2
UBR1-205ENST00000564540 ATP10DQ9P241 1426 aa2.56□□□□□ -2
UBR1-205ENST00000564540 C15orf38-AP3S2A0A0A6YYH1 394 aa2.55□□□□□ -2
UBR1-205ENST00000564540 PPIAL4CA0A0B4J2A2 164 aa2.55□□□□□ -2
UBR1-205ENST00000564540 KIR2DL5BA0A0G2JN68 375 aa2.55□□□□□ -2
UBR1-205ENST00000564540 KIR2DL5BA0A0G2JPC4 375 aa2.55□□□□□ -2
UBR1-205ENST00000564540 CTAGE15A4D2H0 777 aa2.55□□□□□ -2
UBR1-205ENST00000564540 G3V4G9 280 aa2.55□□□□□ -2
UBR1-205ENST00000564540 MSH4O15457 936 aa2.55□□□□□ -2
UBR1-205ENST00000564540 SPAG7O75391 227 aa2.55□□□□□ -2
UBR1-205ENST00000564540 SF3B1O75533 1304 aaKnown RBP eCLIP2.55□□□□□ -22e-6■■■□□ 16.1
UBR1-205ENST00000564540 SURF6O75683 361 aaKnown RBP2.55□□□□□ -2
UBR1-205ENST00000564540 PPIAL4GP0DN37 164 aa2.55□□□□□ -2
UBR1-205ENST00000564540 GZMAP12544 262 aa2.55□□□□□ -2
UBR1-205ENST00000564540 PGCP20142 388 aa2.55□□□□□ -2
UBR1-205ENST00000564540 ATP6V1C1P21283 382 aa2.55□□□□□ -2
UBR1-205ENST00000564540 CA8P35219 290 aa2.55□□□□□ -2
UBR1-205ENST00000564540 ATP5OP48047 213 aa2.55□□□□□ -2
UBR1-205ENST00000564540 NMUP48645 174 aa2.55□□□□□ -2
UBR1-205ENST00000564540 KPNA2P52292 529 aaKnown RBP2.55□□□□□ -2
UBR1-205ENST00000564540 TNFRSF17Q02223 184 aa2.55□□□□□ -2
UBR1-205ENST00000564540 FAM83EQ2M2I3 478 aa2.55□□□□□ -2
UBR1-205ENST00000564540 TMIGD1Q6UXZ0 262 aa2.55□□□□□ -2
UBR1-205ENST00000564540 PRSS41Q7RTY9 318 aa2.55□□□□□ -2
UBR1-205ENST00000564540 CTAGE6Q86UF2 777 aa2.55□□□□□ -2
UBR1-205ENST00000564540 C12orf56Q8IXR9 622 aa2.55□□□□□ -2
UBR1-205ENST00000564540 RDH10Q8IZV5 341 aa2.55□□□□□ -2
UBR1-205ENST00000564540 KIR2DL5AQ8N109 375 aa2.55□□□□□ -2
UBR1-205ENST00000564540 CYB561D1Q8N8Q1 229 aa2.55□□□□□ -2
UBR1-205ENST00000564540 OR9G1Q8NH87 305 aa2.55□□□□□ -2
UBR1-205ENST00000564540 DEDD2Q8WXF8 326 aa2.55□□□□□ -2
UBR1-205ENST00000564540 PHF3Q92576 2039 aaKnown RBP2.55□□□□□ -2
UBR1-205ENST00000564540 OSTF1Q92882 214 aa2.55□□□□□ -2
UBR1-205ENST00000564540 MYLPFQ96A32 169 aa2.55□□□□□ -2
UBR1-205ENST00000564540 C12orf66Q96MD2 445 aa2.55□□□□□ -2
UBR1-205ENST00000564540 CCNL2Q96S94 520 aaPredicted RBP2.55□□□□□ -2
UBR1-205ENST00000564540 WDR76Q9H967 626 aa2.55□□□□□ -2
UBR1-205ENST00000564540 LRRC40Q9H9A6 602 aa2.55□□□□□ -2
UBR1-205ENST00000564540 LHX9Q9NQ69 397 aa2.55□□□□□ -2
UBR1-205ENST00000564540 PDS5BQ9NTI5 1447 aa2.55□□□□□ -2
UBR1-205ENST00000564540 AIPL1Q9NZN9 384 aa2.55□□□□□ -2
UBR1-205ENST00000564540 MRPS7Q9Y2R9 242 aaKnown RBP2.55□□□□□ -2
UBR1-205ENST00000564540 DDX49Q9Y6V7 483 aaKnown RBP2.55□□□□□ -2
UBR1-205ENST00000564540 IGKV1D-17A0A075B6S4 117 aa2.54□□□□□ -2
UBR1-205ENST00000564540 PPIAL4EA0A075B759 164 aa2.54□□□□□ -2
UBR1-205ENST00000564540 IGHV1OR21-1A0A087WYE8 117 aa2.54□□□□□ -2
UBR1-205ENST00000564540 A0A0G2JN53 185 aa2.54□□□□□ -2
UBR1-205ENST00000564540 PPIAL4DF5H284 164 aa2.54□□□□□ -2
UBR1-205ENST00000564540 BOLA2-SMG1P6H3BVE0 249 aa2.54□□□□□ -2
UBR1-205ENST00000564540 CTAGE5O15320 804 aa2.54□□□□□ -2
UBR1-205ENST00000564540 SS18L1O75177 396 aaPredicted RBP2.54□□□□□ -2
UBR1-205ENST00000564540 RHOBTB1O94844 696 aa2.54□□□□□ -2
UBR1-205ENST00000564540 MFN2O95140 757 aa2.54□□□□□ -2
UBR1-205ENST00000564540 UGT2B4P06133 528 aa2.54□□□□□ -2
UBR1-205ENST00000564540 ZNF286BP0CG31 522 aa2.54□□□□□ -2
UBR1-205ENST00000564540 PNMA6AP0CW24 399 aaPredicted RBP2.54□□□□□ -2
UBR1-205ENST00000564540 PPIAL4FP0DN26 164 aa2.54□□□□□ -2
UBR1-205ENST00000564540 TNNI3P19429 210 aa2.54□□□□□ -2
UBR1-205ENST00000564540 FGF9P31371 208 aaPredicted RBP2.54□□□□□ -2
UBR1-205ENST00000564540 SHMT2P34897 504 aa2.54□□□□□ -2
UBR1-205ENST00000564540 CNTN2Q02246 1040 aa2.54□□□□□ -2
UBR1-205ENST00000564540 ZMYND11Q15326 602 aa2.54□□□□□ -2
UBR1-205ENST00000564540 IMMTQ16891 758 aaKnown RBP2.54□□□□□ -2
UBR1-205ENST00000564540 TRIM16LQ309B1 348 aa2.54□□□□□ -2
UBR1-205ENST00000564540 KCTD21Q4G0X4 260 aa2.54□□□□□ -2
UBR1-205ENST00000564540 PMF1Q6P1K2 205 aa2.54□□□□□ -2
UBR1-205ENST00000564540 CBLN3Q6UW01 205 aa2.54□□□□□ -2
UBR1-205ENST00000564540 RNF182Q8N6D2 247 aa2.54□□□□□ -2
UBR1-205ENST00000564540 OR10G3Q8NGC4 313 aa2.54□□□□□ -2
UBR1-205ENST00000564540 OR8J1Q8NGP2 316 aa2.54□□□□□ -2
UBR1-205ENST00000564540 OR2L8Q8NGY9 312 aa2.54□□□□□ -2
UBR1-205ENST00000564540 TSNARE1Q96NA8 513 aa2.54□□□□□ -2
UBR1-205ENST00000564540 ZBTB18Q99592 522 aa2.54□□□□□ -2
UBR1-205ENST00000564540 CCT7Q99832 543 aa2.54□□□□□ -2
UBR1-205ENST00000564540 NAT9Q9BTE0 207 aa2.54□□□□□ -2
UBR1-205ENST00000564540 ALG12Q9BV10 488 aa2.54□□□□□ -2
UBR1-205ENST00000564540 GON7Q9BXV9 100 aa2.54□□□□□ -2
UBR1-205ENST00000564540 GCOM2Q9BZD3 368 aaPredicted RBP2.54□□□□□ -2
UBR1-205ENST00000564540 C20orf85Q9H1P6 137 aa2.54□□□□□ -2
UBR1-205ENST00000564540 VCX2Q9H322 139 aa2.54□□□□□ -2
UBR1-205ENST00000564540 CDC42EP4Q9H3Q1 356 aaKnown RBP2.54□□□□□ -2
UBR1-205ENST00000564540 SMYD3Q9H7B4 428 aa2.54□□□□□ -2
UBR1-205ENST00000564540 TRAF3IP3Q9Y228 551 aa2.54□□□□□ -2
UBR1-205ENST00000564540 GSTK1Q9Y2Q3 226 aa2.54□□□□□ -2
UBR1-205ENST00000564540 TMED5Q9Y3A6 229 aa2.54□□□□□ -2
UBR1-205ENST00000564540 DOCK9Q9BZ29 2069 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms