RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FZD7O75084 574 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 CRLF1O75462 422 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 PRKAR1BP31321 381 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 APOBEC3AP31941 199 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 FABP6P51161 128 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 P2RY4P51582 365 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 NUDT6P53370 316 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 FOXG1P55316 489 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 KRTAP1-1Q07627 177 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 RAB35Q15286 201 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 C3orf36Q3SXR2 165 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 GTDC1Q4AE62 458 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 LRIF1Q5T3J3 769 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 KRT73Q86Y46 540 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 BHLHE22Q8NFJ8 381 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 MAGEE2Q8TD90 523 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 CACNG6Q9BXT2 260 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 LINC00470Q9BZP3 86 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 RPS6KB2Q9UBS0 482 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 PMF1-BGLAPU3KQ54 211 aa13.14□□□□□ -0.31
SPG7-210ENST00000564409 SONP18583 2426 aaKnown RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
SPG7-210ENST00000564409 A0A1W2PR80 420 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 ELOA3DA6NLF2 546 aaPredicted RBP13.13□□□□□ -0.31
SPG7-210ENST00000564409 CD5LO43866 347 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 SSX4O60224 188 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 CSF3P09919 207 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 PNMTP11086 282 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 PRG2P13727 222 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 HOXB9P17482 250 aaPredicted RBP13.13□□□□□ -0.31
SPG7-210ENST00000564409 BNIP2Q12982 314 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 ELOA3BQ3SY89 546 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 REEP3Q6NUK4 255 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
SPG7-210ENST00000564409 PRIMA1Q86XR5 153 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 FAM169BQ8N8A8 192 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 ELOA3Q8NG57 546 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 OR10H5Q8NGA6 315 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 LRRC8CQ8TDW0 803 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
SPG7-210ENST00000564409 RCE1Q9Y256 329 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 ATP23Q9Y6H3 246 aa13.13□□□□□ -0.31
SPG7-210ENST00000564409 LOC102725191A0A1B0GVB3 256 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 NDUFS7O75251 213 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 ARAFP10398 606 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 ZNF43P17038 809 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
SPG7-210ENST00000564409 ATP4BP51164 291 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 MFSD13AQ14CX5 517 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 GCNT6Q5T4J0 391 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 FAM69AQ5T7M9 428 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 C9orf135Q5VTT2 229 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 DHRS4L2Q6PKH6 230 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 SLC2A7Q6PXP3 512 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 C1QTNF6Q9BXI9 259 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
SPG7-210ENST00000564409 FBXO9Q9UK97 447 aaPredicted RBP13.12□□□□□ -0.31
SPG7-210ENST00000564409 ARPC4-TTLL3A0A0A6YYG9 625 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 PRORSD1PA6NEY8 169 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 EVPLLA8MZ36 301 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 RPL36A-HNRNPH2H7BZ11 118 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 AIM2O14862 343 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
SPG7-210ENST00000564409 NUDT7P0C024 238 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 SLC25A16P16260 332 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 GPX2P18283 190 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 IDH3AP50213 366 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 EFNA4P52798 201 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 UBE2NP61088 152 aaKnown RBP13.11□□□□□ -0.31
SPG7-210ENST00000564409 SLC25A3Q00325 362 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 CDK6Q00534 326 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 EGR4Q05215 589 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 ANKRD16Q6P6B7 361 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 ULK3Q6PHR2 472 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 B3GLCTQ6Y288 498 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 EPHX4Q8IUS5 362 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 FUNDC1Q8IVP5 155 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 OR6S1Q8NH40 331 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 STON2Q8WXE9 905 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 SLC38A4Q969I6 547 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 MAL2Q969L2 176 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms