RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MYL2P10916 166 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 RYKP34925 604 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 CLK1P49759 484 aaKnown RBP8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SEC24CP53992 1094 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 DNAJB13P59910 316 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 MAD2L1BPQ15013 274 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-204ENST00000563739 PDCD2Q16342 344 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SHISA2Q6UWI4 295 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 CLECL1Q8IZS7 167 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 LRRC17Q8N6Y2 441 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 FAM169BQ8N8A8 192 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 OR4F15Q8NGB8 312 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 TMEM234Q8WY98 164 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 LRRC58Q96CX6 371 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 ZHX1-C8orf76Q96EF9 292 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 C3orf30Q96M34 536 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 IQCGQ9H095 443 aaKnown RBP8.89□□□□□ -0.99
SF3B3-204ENST00000563739 EXOSC3Q9NQT5 275 aaKnown RBP8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SERINC1Q9NRX5 453 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 TMED7Q9Y3B3 224 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SH3PXD2BA1X283 911 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 SLC28A1O00337 649 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 AZIN1O14977 448 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 POLR3GO15318 223 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF208O43345 1280 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 FRS3O43559 492 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 FZD7O75084 574 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 SPAG7O75391 227 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 STX11O75558 287 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF432O94892 652 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 TFP02787 698 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 GUSBP08236 651 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 CREB1P16220 341 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 PCMT1P22061 227 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 GPR6P46095 362 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 LIMS1P48059 325 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 TGFBR3Q03167 851 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 HNRNPA0Q13151 305 aaKnown RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 SNTB2Q13425 540 aaKnown RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 MAPK11Q15759 364 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 TNFAIP8L3Q5GJ75 292 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 OTUD3Q5T2D3 398 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 KLHL24Q6TFL4 600 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 EIF3MQ7L2H7 374 aaKnown RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 AAED1Q7RTV5 226 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 CCDC63Q8NA47 563 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 POMGNT2Q8NAT1 580 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 BHLHE22Q8NFJ8 381 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 MIPOL1Q8TD10 442 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 MRPL24Q96A35 216 aaKnown RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 ZBTB9Q96C00 473 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 CCDC126Q96EE4 140 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 GATA5Q9BWX5 397 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 CENPHQ9H3R5 247 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 SEC14L4Q9UDX3 406 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 MID2Q9UJV3 735 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 FBXO9Q9UK97 447 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 FAF1Q9UNN5 650 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-204ENST00000563739 PCDHB14Q9Y5E9 798 aa8.88□□□□□ -0.99
SF3B3-204ENST00000563739 FTCDNL1E5RQL4 147 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PIP5K1BO14986 540 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 ANKRD28O15084 1053 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TYROBPO43914 113 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 NPIPB7O75200 414 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SKAP2O75563 359 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 CHRNGP07510 517 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 KRT16P08779 473 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 MYZAPP0CAP1 466 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 NEFHP12036 1026 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 CBR1P16152 277 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TCN1P20061 433 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 RPS4Y1P22090 263 aaKnown RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 ACHEP22303 614 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TACR3P29371 465 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 RBMXP38159 391 aaKnown RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SLC1A3P43003 542 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 ALDH3B1P43353 468 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 IDH2P48735 452 aaKnown RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SLC35A1P78382 337 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PCLAFQ15004 111 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 FXNQ16595 210 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 GALNTL6Q49A17 601 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PHYHD1Q5SRE7 291 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 KRT80Q6KB66 452 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 CREB3L2Q70SY1 520 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 C6orf120Q7Z4R8 191 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 MDP1Q86V88 176 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 OR51F2Q8NH61 342 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TCP10LQ8TDR4 215 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 C22orf15Q8WYQ4 148 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 RAB8BQ92930 207 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF48Q96MX3 618 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 C1orf50Q9BV19 199 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SF3B5Q9BWJ5 86 aaKnown RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 LINC00470Q9BZP3 86 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 OR51I1Q9H343 314 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SSU72Q9NP77 194 aaKnown RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 DYNLRB1Q9NP97 96 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms