RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PAMR1Q6UXH9 720 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 LRRC74BQ6ZQY2 392 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 ACOT7LQ6ZUV0 252 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 EIF3MQ7L2H7 374 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 ZNF589Q86UQ0 364 aaPredicted RBP2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 NUDCD3Q8IVD9 361 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 SKA3Q8IX90 412 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 GPD1LQ8N335 351 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 FTMTQ8N4E7 242 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 TPRX1Q8N7U7 411 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 OR4F6Q8NGB9 312 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 FANK1Q8TC84 345 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 ZPLD1Q8TCW7 415 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 MRAPQ8TCY5 172 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 NUS1Q96E22 293 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 CNN2Q99439 309 aaKnown RBP2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 BPIFA3Q9BQP9 254 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 C11orf70Q9BRQ4 267 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 HES7Q9BYE0 225 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 SMYD3Q9H7B4 428 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 NEK6Q9HC98 313 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 ZNF160Q9HCG1 818 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 GLRX2Q9NS18 164 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 STARD10Q9Y365 291 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 CAB39Q9Y376 341 aaPredicted RBP2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 FLVCR1Q9Y5Y0 555 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 PEX16Q9Y5Y5 336 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
SHCBP1-202ENST00000563219 A6NIZ1 184 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 OR5B21A6NL26 309 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TCP11X1B4DZS4 312 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 H0YC42 278 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 WWP2O00308 870 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TBL1XO60907 577 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CDH16O75309 829 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CABYRO75952 493 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 OR2J3O76001 311 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 OR7A10O76100 309 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 LALBAP00709 142 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 FTH1P02794 183 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 KLK3P07288 261 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 MCF2P10911 925 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 KITLGP21583 273 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CXCR2P25025 360 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 NTSP30990 170 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ATP5C1P36542 298 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PTGDSP41222 190 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 KLK7P49862 253 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ACLYP53396 1101 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 RAP1BP61224 184 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 RPS15P62841 145 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 KCNJ2P63252 427 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TGFBR3Q03167 851 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CHRNB3Q05901 458 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PDIA2Q13087 525 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ARL6IP1Q15041 203 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PAGE2BQ5JRK9 111 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 SOHLH1Q5JUK2 328 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF658Q5TYW1 1059 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CGB2Q6NT52 195 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF836Q6ZNA1 936 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PAQR7Q86WK9 346 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 FBXO16Q8IX29 292 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 SVOPLQ8N434 492 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 FBXL16Q8N461 479 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 BPIFCQ8NFQ6 507 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 OR52I1Q8NGK6 324 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 OR5B3Q8NH48 314 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 BRSK1Q8TDC3 778 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 MARC2Q969Z3 335 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TSNARE1Q96NA8 513 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 MS4A4EQ96PG1 132 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 MBOAT4Q96T53 435 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TSG101Q99816 390 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CNPY3Q9BT09 278 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 SRXN1Q9BYN0 137 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 Q9H3A6 140 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM185BQ9H7F4 350 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 ISG20L2Q9H9L3 353 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 CRLF2Q9HC73 371 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 RPRD1BQ9NQG5 326 aaKnown RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 NUDT15Q9NV35 164 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 B4GALT7Q9UBV7 327 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PACSIN2Q9UNF0 486 aaPredicted RBP2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 V9GY05 133 aa2.4□□□□□ -2.03
SHCBP1-202ENST00000563219 PHF3Q92576 2039 aaKnown RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 IGLV8-61A0A075B6I0 122 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 IGLV3-22A0A075B6J6 115 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 IGLV3-10A0A075B6K4 115 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 A0A1W2PNU3 283 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 A0A1W2PPE3 182 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 C9JVG2 144 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 H6PDO95479 791 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 C1orf105O95561 183 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 STSP08842 583 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 KRTAP1-4P0C5Y4 121 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 OR8G3PP0DMU2 310 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF24P17028 368 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 KIR2DS2P43631 304 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms