RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 OR1L4Q8NGR5 311 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 HTR3CQ8WXA8 447 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 ST8SIA1Q92185 356 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 N4BP2L2Q92802 583 aaPredicted RBP4.47□□□□□ -1.69
SMG1-204ENST00000561940 NT5C3BQ969T7 300 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 FAM122AQ96E09 287 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 ROPN1BQ9BZX4 212 aaPredicted RBP4.47□□□□□ -1.69
SMG1-204ENST00000561940 RBKSQ9H477 322 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 EHD1Q9H4M9 534 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 ABCG2Q9UNQ0 655 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 UNC13BO14795 1591 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 PLXNC1O60486 1568 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 TDRD6O60522 2096 aaKnown RBP4.46□□□□□ -1.7
SMG1-204ENST00000561940 ITSN2Q9NZM3 1697 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 TIAM1Q13009 1591 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 DIP2AQ14689 1571 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 SAMD9LQ8IVG5 1584 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 TRIM64CA6NLI5 447 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 E7ENQ6 273 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 GFYI3L273 518 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 MBTPS2O43462 519 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 MED7O43513 233 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 DNAH10OSP0CZ25 163 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 ATP6V1B2P21281 511 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 CCR1P32246 355 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 UGT1A5P35504 534 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 CEBPDP49716 269 aaPredicted RBP4.46□□□□□ -1.7
SMG1-204ENST00000561940 SLC26A2P50443 739 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 HNRNPA3P51991 378 aaKnown RBP4.46□□□□□ -1.7
SMG1-204ENST00000561940 RIPPLY3P57055 190 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 CDK16Q00536 496 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 KYAT1Q16773 422 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 RABL6Q3YEC7 729 aaPredicted RBP4.46□□□□□ -1.7
SMG1-204ENST00000561940 CARD16Q5EG05 197 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 PGAP1Q75T13 922 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 TMEM252Q8N6L7 170 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 OR52H1Q8NGJ2 320 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 FBXO32Q969P5 355 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 UBE2E3Q969T4 207 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 TCEANC2Q96MN5 208 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 TRIM62Q9BVG3 475 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 SGK2Q9HBY8 427 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 B4GALT7Q9UBV7 327 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 XIRP1Q702N8 1843 aaKnown RBP4.46□□□□□ -1.7
SMG1-204ENST00000561940 MROH1Q8NDA8 1641 aa4.46□□□□□ -1.7
SMG1-204ENST00000561940 ZC3H13Q5T200 1668 aaKnown RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 PLEKHH2Q8IVE3 1493 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 TCRBV9S1A1TA0A576 114 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 TSPAN12O95859 305 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 LGI1O95970 557 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 ANXA13P27216 316 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 RBMXP38159 391 aaKnown RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 PLK1P53350 603 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 PKNOX1P55347 436 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 STX17P56962 302 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 ZNF45Q02386 682 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 DUSP7Q16829 419 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 BCL7AQ4VC05 210 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 OR52E8Q6IFG1 317 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 WDR74Q6RFH5 385 aaPredicted RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 TMEM179BQ7Z7N9 219 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 TRIM69Q86WT6 500 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 TGIF2LYQ8IUE0 185 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 ALLCQ8N6M5 410 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 BBS1Q8NFJ9 593 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 OR4K14Q8NGD5 310 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 MAGEE2Q8TD90 523 aaPredicted RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 TECTBQ96PL2 329 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 CLCC1Q96S66 551 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 YTHDF1Q9BYJ9 559 aaKnown RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 RAB34Q9BZG1 259 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 METTL7AQ9H8H3 244 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 ISG20L2Q9H9L3 353 aaKnown RBP4.45□□□□□ -1.7
SMG1-204ENST00000561940 MARCH5Q9NX47 278 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 IL17CQ9P0M4 197 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 UGT2A1Q9Y4X1 527 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 DCCP43146 1447 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 EP400Q96L91 3159 aa4.45□□□□□ -1.7
SMG1-204ENST00000561940 SAMD9Q5K651 1589 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 PIK3R4Q99570 1358 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 THSD7BQ9C0I4 1608 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 PALMO75781 387 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 OXSR1O95747 527 aaPredicted RBP4.44□□□□□ -1.7
SMG1-204ENST00000561940 CALCRP30988 508 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 SHMT2P34897 504 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 KLK7P49862 253 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 PLD1Q13393 1074 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 ARL6IP1Q15041 203 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 KLF17Q5JT82 389 aaPredicted RBP4.44□□□□□ -1.7
SMG1-204ENST00000561940 ENPP6Q6UWR7 440 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 VRK2Q86Y07 508 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 C14orf178Q8N769 122 aaPredicted RBP4.44□□□□□ -1.7
SMG1-204ENST00000561940 MARC2Q969Z3 335 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 C16orf74Q96GX8 76 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 OXGR1Q96P68 337 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 SMIM14Q96QK8 99 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 OR51J1Q9H342 316 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 REEP4Q9H6H4 257 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 NHEJ1Q9H9Q4 299 aaPredicted RBP4.44□□□□□ -1.7
SMG1-204ENST00000561940 THUMPD1Q9NXG2 353 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms