RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MUS81Q96NY9 551 aa22.18■■□□□ 1.14
NME3-202ENST00000561637 ZNF385DQ9H6B1 395 aa22.18■■□□□ 1.14
NME3-202ENST00000561637 CACYBPQ9HB71 228 aaKnown RBP22.18■■□□□ 1.14
NME3-202ENST00000561637 A0A1W2PP18 115 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 FTCDNL1E5RQL4 147 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 AAED1Q7RTV5 226 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 RETREG3Q86VR2 466 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 P2RY8Q86VZ1 359 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 SLC25A36Q96CQ1 311 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 MAGEB18Q96M61 343 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 AMBRA1Q9C0C7 1298 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 CISD1Q9NZ45 108 aaKnown RBP22.17■■□□□ 1.14
NME3-202ENST00000561637 UPB1Q9UBR1 384 aa22.17■■□□□ 1.14
NME3-202ENST00000561637 IGKV1D-42A0A075B6H8 117 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 A0A1B0GWA3 101 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 E7EQL1 145 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 M0R1B8 84 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 ETS2P15036 469 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 CDH2P19022 906 aaPredicted RBP22.16■■□□□ 1.14
NME3-202ENST00000561637 RPS5P46782 204 aaKnown RBP22.16■■□□□ 1.14
NME3-202ENST00000561637 SELENOPP49908 381 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 SCARB2Q14108 478 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 LINGO2Q7L985 606 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 EPHX4Q8IUS5 362 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
NME3-202ENST00000561637 TRAF4Q9BUZ4 470 aaPredicted RBP22.16■■□□□ 1.14
NME3-202ENST00000561637 TAPBPLQ9BX59 468 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 NPHS2Q9NP85 383 aa22.16■■□□□ 1.14
NME3-202ENST00000561637 PNMTP11086 282 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 CD40P25942 277 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 PRKAR1BP31321 381 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 ZSWIM7Q19AV6 140 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 HIKESHIQ53FT3 197 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 REEP3Q6NUK4 255 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 SF3B5Q9BWJ5 86 aaKnown RBP22.15■■□□□ 1.14
NME3-202ENST00000561637 SLCO5A1Q9H2Y9 848 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 SLC17A5Q9NRA2 495 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 PARPBPQ9NWS1 579 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 GDF2Q9UK05 429 aaPredicted RBP22.15■■□□□ 1.14
NME3-202ENST00000561637 GMEB1Q9Y692 573 aa22.15■■□□□ 1.14
NME3-202ENST00000561637 AHSA1O95433 338 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 IGHV4-39P01824 125 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 GPX2P18283 190 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 CLEC12BQ2HXU8 276 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 RUNDC3AQ59EK9 446 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 DHRS4L2Q6PKH6 230 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 CREB3L2Q70SY1 520 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 PTOV1Q86YD1 416 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 HIPK1Q86Z02 1210 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 STK35Q8TDR2 534 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 TMEM158Q8WZ71 300 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 GTPBP3Q969Y2 492 aaKnown RBP22.14■■□□□ 1.13
NME3-202ENST00000561637 ARMC7Q9H6L4 198 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 VIPAS39Q9H9C1 493 aa22.14■■□□□ 1.13
NME3-202ENST00000561637 HEATR1Q9H583 2144 aaKnown RBP22.13■■□□□ 1.13
NME3-202ENST00000561637 ELOA3DA6NLF2 546 aaPredicted RBP22.13■■□□□ 1.13
NME3-202ENST00000561637 TPST2O60704 377 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 EDF1O60869 148 aaKnown RBP22.13■■□□□ 1.13
NME3-202ENST00000561637 LGI1O95970 557 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 CBLP22681 906 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 MTPNP58546 118 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 SF3A3Q12874 501 aaKnown RBP eCLIP22.13■■□□□ 1.13
NME3-202ENST00000561637 VEZF1Q14119 521 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 ELOA3BQ3SY89 546 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 TMEM225Q6GV28 225 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 C6orf89Q6UWU4 347 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 DHDDSQ86SQ9 333 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 ELOA3Q8NG57 546 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 TAAR8Q969N4 342 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 ALKBH3Q96Q83 286 aaPredicted RBP22.13■■□□□ 1.13
NME3-202ENST00000561637 REG4Q9BYZ8 158 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 TMEM38AQ9H6F2 299 aa22.13■■□□□ 1.13
NME3-202ENST00000561637 UPK3AO75631 287 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 IFNA2P01563 188 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 PPIBP23284 216 aaKnown RBP22.12■■□□□ 1.13
NME3-202ENST00000561637 MPGP29372 298 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 ACVR1BP36896 505 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 OR7E24Q6IFN5 339 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 SLC22A25Q6T423 547 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 TMEM108Q6UXF1 575 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 DTX2Q86UW9 622 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 SMYD1Q8NB12 490 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 MFSD8Q8NHS3 518 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 SLC35B4Q969S0 331 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 B3GAT1Q9P2W7 334 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 RPS6KB2Q9UBS0 482 aa22.12■■□□□ 1.13
NME3-202ENST00000561637 TMCC2O75069 709 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 OPN1SWP03999 348 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 NIPAL3Q6P499 406 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 HTRA1Q92743 480 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 YAE1D1Q9NRH1 226 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 TMEM45AQ9NWC5 275 aa22.11■■□□□ 1.13
NME3-202ENST00000561637 LEF1Q9UJU2 399 aaPredicted RBP22.11■■□□□ 1.13
NME3-202ENST00000561637 A0A0G2JND7 137 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 M0R082 166 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 M0R3H8 397 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 SLC6A2P23975 617 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 TUBA1BP68363 451 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 TUBA4AP68366 448 aa22.1■■□□□ 1.13
NME3-202ENST00000561637 TUBA1AQ71U36 451 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms