RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 DAP3P51398 398 aaKnown RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 PRPS1P60891 318 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 GABPB1Q06547 395 aaPredicted RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 PUDPQ08623 228 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 GK3PQ14409 553 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 CTU2Q2VPK5 515 aaKnown RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 ALKBH2Q6NS38 261 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 NIPAL3Q6P499 406 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 MEX3BQ6ZN04 569 aaKnown RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 NCCRP1Q6ZVX7 275 aaPredicted RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 CCDC103Q8IW40 242 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 OFCC1Q8IZS5 231 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 RPRMLQ8N4K4 120 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 TMEM99Q8N816 258 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 STEAP2Q8NFT2 490 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 ZNF417Q8TAU3 575 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 KISS1RQ969F8 398 aaPredicted RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 TAAR8Q969N4 342 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 BPIFA2Q96DR5 249 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 CLPTM1LQ96KA5 538 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 ALPK1Q96QP1 1244 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 ZNF587Q96SQ5 575 aaPredicted RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 NPAS1Q99742 590 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 MED18Q9BUE0 208 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 ENKD1Q9H0I2 346 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 LRMDAQ9H2I8 198 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 COQ10BQ9H8M1 238 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 PLSCR4Q9NRQ2 329 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 ASB6Q9NWX5 421 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 MRPL39Q9NYK5 338 aaKnown RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 KIF17Q9P2E2 1029 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 GMPR2Q9P2T1 348 aaKnown RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 PLEKHB1Q9UF11 243 aaPredicted RBP9.56□□□□□ -0.88
TPM1-229ENST00000561242 CHST2Q9Y4C5 530 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 FAM208BQ5VWN6 2430 aa9.56□□□□□ -0.88
TPM1-229ENST00000561242 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 CACNA1GO43497 2377 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 A0A1W2PRQ8 180 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ZC3H12DA2A288 527 aaKnown RBP9.55□□□□□ -0.88
TPM1-229ENST00000561242 ENO4A6NNW6 628 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ZNF587BE7ETH6 402 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ADAM11O75078 769 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 DEAF1O75398 565 aaPredicted RBP9.55□□□□□ -0.88
TPM1-229ENST00000561242 CNOT4O95628 575 aaKnown RBP9.55□□□□□ -0.88
TPM1-229ENST00000561242 IMPDH2P12268 514 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 PPP3CBP16298 524 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 PTNP21246 168 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ATP6V1B2P21281 511 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 SLC9A3P48764 834 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 CLDN17P56750 224 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 CLRN1P58418 232 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ITGADQ13349 1161 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 DGCR6Q14129 220 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 P2RY6Q15077 328 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 MBOAT2Q6ZWT7 520 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ZNF610Q8N9Z0 462 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ADPRHL1Q8NDY3 354 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 OR9K2Q8NGE7 335 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 OR52L1Q8NGH7 329 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 GNPDA2Q8TDQ7 276 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 TMEM255BQ8WV15 326 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 ADAD1Q96M93 576 aaKnown RBP9.55□□□□□ -0.88
TPM1-229ENST00000561242 KCNS3Q9BQ31 491 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 CHID1Q9BWS9 393 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 BCO1Q9HAY6 547 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 INIPQ9NRY2 104 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 GALNT8Q9NY28 637 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 POMPQ9Y244 141 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 POFUT2Q9Y2G5 429 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 GPR52Q9Y2T5 361 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 SAMHD1Q9Y3Z3 626 aaKnown RBP9.55□□□□□ -0.88
TPM1-229ENST00000561242 SPTA1P02549 2419 aa9.55□□□□□ -0.88
TPM1-229ENST00000561242 B4DXG7 233 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 J3KTA2 159 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 SMAD9O15198 467 aaKnown RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 GSTM3P21266 225 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 PAX7P23759 505 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 AGTR1P30556 359 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 CD79BP40259 229 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 KIR2DL2P43627 348 aaPredicted RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 ZNF84P51523 738 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 UGT2B15P54855 530 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 UBE2NP61088 152 aaKnown RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 POU3F1Q03052 451 aaPredicted RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 FAPQ12884 760 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 FOXF2Q12947 444 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 ZNF74Q16587 644 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 ALG10Q5BKT4 473 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 FBXW9Q5XUX1 488 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 OR2T5Q6IEZ7 315 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 OR7E24Q6IFN5 339 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 PLXDC2Q6UX71 529 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 PXKQ7Z7A4 578 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 NKAIN4Q8IVV8 208 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms