RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 C8GP07360 202 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PABPC4LP0CB38 370 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 CTAGE8P0CG41 777 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CT45A8P0DMV1 189 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CT45A9P0DMV2 189 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 C1GALT1C1LP0DN25 315 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PPIAL4FP0DN26 164 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 IGHV4-38-2P0DP08 117 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 LYL1P12980 280 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CD22P20273 847 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 GSTM2P28161 218 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 SHC1P29353 583 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 TIA1P31483 386 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERC1-211ENST00000560983 PPICP45877 212 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 MTNR1AP48039 350 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 EMDP50402 254 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 HNRNPH2P55795 449 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 EIF3EP60228 445 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 CRADDP78560 199 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 GALEQ14376 348 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PTGR1Q14914 329 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 DEFB112Q30KQ8 113 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 SLC9B1Q4ZJI4 515 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CT45A2Q5DJT8 189 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 LGSNQ5TDP6 509 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 FBXW9Q5XUX1 488 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 HBMQ6B0K9 141 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 MRNIPQ6NTE8 343 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 ACSM6Q6P461 480 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 DARS2Q6PI48 645 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 KRT77Q7Z794 578 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 SDCCAG8Q86SQ7 713 aaPredicted RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 LINC00523Q86TU6 105 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 GPR180Q86V85 440 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 WDFY1Q8IWB7 410 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CTAGE4Q8IX94 777 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CDK20Q8IZL9 346 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CEP112Q8N8E3 955 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 ZSCAN4Q8NAM6 433 aaPredicted RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 WFDC9Q8NEX5 89 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 TRIM58Q8NG06 486 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 TTLQ8NG68 377 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 OR52L2PQ8NGH6 319 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 FBXO30Q8TB52 745 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 GLMPQ8WWB7 406 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 CCT6BQ92526 530 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 RDH5Q92781 318 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 KCNJ9Q92806 393 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 LRRC45Q96CN5 670 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 NAP1L3Q99457 506 aaPredicted RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 GPR21Q99679 349 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PSD2Q9BQI7 771 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 SLC30A2Q9BRI3 323 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PELOQ9BRX2 385 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 LRRC1Q9BTT6 524 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 MYLK2Q9H1R3 596 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 TPK1Q9H3S4 243 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 C16orf95Q9H693 158 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 COPS7BQ9H9Q2 264 aaPredicted RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 TNFRSF19Q9NS68 423 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 FAM120CQ9NX05 1096 aaKnown RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 FLRT3Q9NZU0 649 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 LCMT1Q9UIC8 334 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 ZNF639Q9UID6 485 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 LEF1Q9UJU2 399 aaPredicted RBP3.13□□□□□ -1.91
HERC1-211ENST00000560983 ASB4Q9Y574 426 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 KCNE2Q9Y6J6 123 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
HERC1-211ENST00000560983 EXPH5Q8NEV8 1989 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 IGHV3OR16-10A0A075B7F0 116 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 CIB4A0PJX0 185 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 ANKDD1BA6NHY2 528 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 SAP18O00422 153 aaKnown RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 CLGNO14967 610 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 UGDHO60701 494 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 ENO1P06733 434 aaKnown RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 ERCC1P07992 297 aaPredicted RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 ITGA5P08648 1049 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 H2AFZP0C0S5 128 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 HIST1H2AGP0C0S8 130 aaPredicted RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 IGLL1P15814 213 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 TCN1P20061 433 aaPredicted RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 HIST1H2ADP20671 130 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 PEX2P28328 305 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 CALCRP30988 508 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 EVI2BP34910 448 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 FEN1P39748 380 aaKnown RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 CASP2P42575 452 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 SLC1A3P43003 542 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 VPS41P49754 854 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 ATP4BP51164 291 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 PNLIPRP2P54317 469 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 NAP1L1P55209 391 aaKnown RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 RAB10P61026 200 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 LCN2P80188 198 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 MRPS11P82912 194 aaKnown RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 POU3F1Q03052 451 aaPredicted RBP3.12□□□□□ -1.91
HERC1-211ENST00000560983 TGM3Q08188 693 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 ZNF154Q13106 437 aa3.12□□□□□ -1.91
HERC1-211ENST00000560983 EFR3AQ14156 821 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms