RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MCHR1Q99705 422 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 PIGQQ9BRB3 760 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 VNN3Q9NY84 501 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 TESQ9UGI8 421 aaKnown RBP18.38■□□□□ 0.53
PSEN1-225ENST00000560005 A4GNTQ9UNA3 340 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 WIF1Q9Y5W5 379 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 USF3Q68DE3 2245 aa18.38■□□□□ 0.53
PSEN1-225ENST00000560005 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 SCDO00767 359 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 TNFSF13O75888 250 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 CRYGSP22914 178 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 IGFBP5P24593 272 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 IFNGR2P38484 337 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 TMED10P49755 219 aaKnown RBP18.37■□□□□ 0.53
PSEN1-225ENST00000560005 CLK3P49761 638 aaKnown RBP18.37■□□□□ 0.53
PSEN1-225ENST00000560005 PLCXD2Q0VAA5 305 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 PDZK1Q5T2W1 519 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 KDM4DQ6B0I6 523 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 FAHD1Q6P587 224 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 OR10G2Q8NGC3 310 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 OR4D11Q8NGI4 311 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 OR1J4Q8NGS1 313 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 TFAP2CQ92754 450 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 SLC38A4Q969I6 547 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 MED18Q9BUE0 208 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 ADI1Q9BV57 179 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 RSPO3Q9BXY4 272 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-225ENST00000560005 TMEM27Q9HBJ8 222 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 KCNE5Q9UJ90 142 aa18.37■□□□□ 0.53
PSEN1-225ENST00000560005 RAI1Q7Z5J4 1906 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-225ENST00000560005 SERINC4A6NH21 518 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 OR6C70A6NIJ9 312 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 J3KTA2 159 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 FFAR1O14842 300 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 CYP7B1O75881 506 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 CAPGP40121 348 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 RPP38P78345 283 aaKnown RBP18.36■□□□□ 0.53
PSEN1-225ENST00000560005 GANABQ14697 944 aaKnown RBP18.36■□□□□ 0.53
PSEN1-225ENST00000560005 NNATQ16517 81 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 EXOC3L2Q2M3D2 409 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 KLHL26Q53HC5 615 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 PLEKHM3Q6ZWE6 761 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 RBM45Q8IUH3 476 aaKnown RBP18.36■□□□□ 0.53
PSEN1-225ENST00000560005 PRR22Q8IZ63 422 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 ZNF614Q8N883 585 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 OR52J3Q8NH60 311 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 UCN2Q96RP3 112 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 TRIM2Q9C040 744 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 SMURF2Q9HAU4 748 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 KRT84Q9NSB2 600 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 CLCF1Q9UBD9 225 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 MGAT4BQ9UQ53 548 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 POFUT2Q9Y2G5 429 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 CHST2Q9Y4C5 530 aa18.36■□□□□ 0.53
PSEN1-225ENST00000560005 HEATR5AQ86XA9 2040 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 A0A1W2PNV4 684 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 A0A1W2PQD3 144 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 MSTNO14793 375 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 TSPAN2O60636 221 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 UGT2B11O75310 529 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 SMNDC1O75940 238 aaKnown RBP eCLIP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 UTS2O95399 124 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 PRKACGP22612 351 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 PPP1R8Q12972 351 aaKnown RBP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 PIN1Q13526 163 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 SLC36A3Q495N2 470 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 FGD3Q5JSP0 725 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 EEF1A1P5Q5VTE0 462 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 RRM2BQ7LG56 351 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 HMGN2P46Q86SG4 172 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 EFHD2Q96C19 240 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 OMA1Q96E52 524 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 ANKRD60Q9BZ19 345 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 METTL7AQ9H8H3 244 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 KRCC1Q9NPI7 259 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 RLIMQ9NVW2 624 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 MAGED1Q9Y5V3 778 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-225ENST00000560005 EXPH5Q8NEV8 1989 aa18.35■□□□□ 0.53
PSEN1-225ENST00000560005 NPIPA5A0A0B4J1W7 369 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 TRAPPC13A5PLN9 417 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 NPIPA7E9PJI5 369 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 PPM1BO75688 479 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 CSTAP01040 98 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 NPIPA8P0DM63 369 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 ABCD3P28288 659 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 CCKARP32238 428 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 CD79BP40259 229 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 NR1H2P55055 460 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 IL18R1Q13478 541 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 NPTX1Q15818 432 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 ENTPD8Q5MY95 495 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 C6orf52Q5T4I8 152 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 ZNF613Q6PF04 617 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 NUP54Q7Z3B4 507 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 COMTD1Q86VU5 262 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 HS3ST5Q8IZT8 346 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 OR14L1PQ8NHC6 308 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 CYGBQ8WWM9 190 aa18.34■□□□□ 0.53
PSEN1-225ENST00000560005 TMCO6Q96DC7 493 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms