RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 EGR4Q05215 589 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 BSPH1Q075Z2 132 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 C1DQ13901 141 aaKnown RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 DUSP7Q16829 419 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 LRRC23Q53EV4 343 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 COQ5Q5HYK3 327 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 TIMM23BQ5SRD1 257 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 NCMAPQ5T1S8 102 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 FAM69AQ5T7M9 428 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 FAM91A1Q658Y4 838 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 NANOGP8Q6NSW7 305 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ADAM5Q6NVV9 412 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 KLHL24Q6TFL4 600 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 C6orf89Q6UWU4 347 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ABHD12BQ7Z5M8 362 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 NET1Q7Z628 596 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 TGIF2LYQ8IUE0 185 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 KDM8Q8N371 416 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 POMGNT2Q8NAT1 580 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 OR8J3Q8NGG0 315 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ZNF417Q8TAU3 575 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 TMEM171Q8WVE6 324 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 C10orf82Q8WW14 230 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 RASSF5Q8WWW0 418 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 AKAP1Q92667 903 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNX1-207ENST00000559401 PROX1Q92786 737 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 FBXW5Q969U6 566 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 TMEM45BQ96B21 275 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 RCN3Q96D15 328 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ZNF385AQ96PM9 386 aaKnown RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 ALKBH3Q96Q83 286 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 EPYCQ99645 322 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ARHGDIGQ99819 225 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 PTDSS2Q9BVG9 487 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ASPNQ9BXN1 380 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 RSPO3Q9BXY4 272 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 NSRP1Q9H0G5 558 aaKnown RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 CXXC4Q9H2H0 198 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 SLCO5A1Q9H2Y9 848 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 NANOGQ9H9S0 305 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 C12orf10Q9HB07 376 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 SEC14L4Q9UDX3 406 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 TEP1Q99973 2627 aaKnown RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 MED13LQ71F56 2210 aa7.21□□□□□ -1.25
SNX1-207ENST00000559401 PRRC2AP48634 2157 aaKnown RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 PRR14LQ5THK1 2151 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 IGKV1D-42A0A075B6H8 117 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 A0A087WUJ7 227 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 A0A0B4J2E0 115 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 A0A1B0GX12 115 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 FTCDNL1E5RQL4 147 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ZNF587BE7ETH6 402 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 M0R1B8 84 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 FXYD1O00168 92 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 KPNA4O00629 521 aaPredicted RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 ABCD4O14678 606 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ARHGEF9O43307 516 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 AKAP8O43823 692 aaKnown RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 CCDC22O60826 627 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SERPINI2O75830 405 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 LGI1O95970 557 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 NPPAP01160 153 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ITGA5P08648 1049 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 CD247P20963 164 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SELENOPP49908 381 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 FOXG1P55316 489 aaPredicted RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 LGALS3BPQ08380 585 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 FOXD4Q12950 439 aaPredicted RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 MFSD13AQ14CX5 517 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 GABRA6Q16445 453 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 NRF1Q16656 503 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ENTPD8Q5MY95 495 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 Q5PR19 223 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 OR7E24Q6IFN5 339 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ERICH5Q6P6B1 374 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 KLHL17Q6TDP4 642 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 CREB3L2Q70SY1 520 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SSX8Q7RTT4 187 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SPATA21Q7Z572 469 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 P2RY8Q86VZ1 359 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 RBM45Q8IUH3 476 aaKnown RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 PIAS4Q8N2W9 510 aaPredicted RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 ZIC4Q8N9L1 334 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 WFDC11Q8NEX6 87 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 KBTBD8Q8NFY9 601 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 OR2T12Q8NG77 320 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 GPR32P1Q8NGA4 272 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 OR6T1Q8NGN1 323 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 NEUROG1Q92886 237 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 TAAR8Q969N4 342 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 TAMM41Q96BW9 452 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 ELAC2Q9BQ52 826 aaKnown RBP7.21□□□□□ -1.26
SNX1-207ENST00000559401 WFDC6Q9BQY6 131 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 C1QTNF6Q9BXI9 259 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 POU2F3Q9UKI9 436 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SLC7A7Q9UM01 511 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 USP22Q9UPT9 525 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.26
SNX1-207ENST00000559401 SH3GLB1Q9Y371 365 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms