RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 GGTA1PQ4G0N0 100 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 HSP90AA5PQ58FG0 334 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 GPR157Q5UAW9 335 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TPGS2Q68CL5 300 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 ZNF620Q6ZNG0 422 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 GET4Q7L5D6 327 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TMEM183AQ8IXX5 376 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 OR2L13Q8N349 312 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TEX9Q8N6V9 391 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 CYB561D1Q8N8Q1 229 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 Q8N976 141 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 OR4F15Q8NGB8 312 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 UBALD1Q8TB05 177 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 DTX3LQ8TDB6 740 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TBC1D31Q96DN5 1066 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 C16orf45Q96MC5 204 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TAAR1Q96RJ0 339 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 NPAS2Q99743 824 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 OMDQ99983 421 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TMEM246Q9BRR3 403 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 ZNF416Q9BWM5 594 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 RWDD1Q9H446 243 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-207ENST00000558919 POPDC2Q9HBU9 364 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 IL26Q9NPH9 171 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 GLRX2Q9NS18 164 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 QPCTLQ9NXS2 382 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TET2Q6N021 2002 aaPredicted RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 IQANK1A0A1B0GTG1 560 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 LOC110117498-PIK3R3F6TDL0 507 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 K7EPI3 171 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 BTN3A3O00478 584 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 BET1O15155 118 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 SLC31A2O15432 143 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 ANGPTL7O43827 346 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 N4BP1O75113 896 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 AK1P00568 194 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 DESP17661 470 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 MDH1P40925 334 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 CXCL5P42830 114 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 PKNOX1P55347 436 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 MESDQ14696 234 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 MARCH8Q5T0T0 291 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 BEND3Q5T5X7 828 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 BLOC1S2Q6QNY1 142 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 AFTPHQ6ULP2 937 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 Q6ZN92 141 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 SLC26A11Q86WA9 606 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 GRAMD2AQ8IUY3 354 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 RNF182Q8N6D2 247 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 CCDC54Q8NEL0 328 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 ITCHQ96J02 903 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 RIOK1Q9BRS2 568 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 RIOK2Q9BVS4 552 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 SRMSQ9H3Y6 488 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 CLMPQ9H6B4 373 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 LIN28AQ9H9Z2 209 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 IL36GQ9NZH8 169 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 RPL36Q9Y3U8 105 aaKnown RBP1.98□□□□□ -2.09
VPS13C-207ENST00000558919 OR10H1Q9Y4A9 318 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 HEBP2Q9Y5Z4 205 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 PIKFYVEQ9Y2I7 2098 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 CARMIL3Q8ND23 1372 aa1.98□□□□□ -2.09
VPS13C-207ENST00000558919 A0A1B0GWJ7 208 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 PEX7O00628 323 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 PFKFB2O60825 505 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 NOL3O60936 208 aaKnown RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 BCAS1O75363 584 aaPredicted RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 SUPT3HO75486 399 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 TM7SF2O76062 418 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 DIRAS3O95661 229 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 HEXBP07686 556 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ABOP16442 354 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 HNF1AP20823 631 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 IMPDH1P20839 514 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 MMP11P24347 488 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 MAP3K8P41279 467 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ACAA2P42765 397 aaKnown RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 POLR2FP61218 127 aaKnown RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ACTA2P62736 377 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ACTC1P68032 377 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 CYTH1Q15438 398 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 RSPO1Q2MKA7 263 aaPredicted RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 OR2G6Q5TZ20 316 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 HSDL2Q6YN16 418 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ZNF573Q86YE8 665 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 TTC5Q8N0Z6 440 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ACOT11Q8WXI4 607 aaPredicted RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 OSTF1Q92882 214 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 CMTM7Q96FZ5 175 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 AMDHD1Q96NU7 426 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 EDEM2Q9BV94 578 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 RAB34Q9BZG1 259 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 RANBP3Q9H6Z4 567 aaPredicted RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 OPN4Q9UHM6 478 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ISY1Q9ULR0 285 aaKnown RBP1.97□□□□□ -2.09
VPS13C-207ENST00000558919 ATP6V0A2Q9Y487 856 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 KIF3AQ9Y496 699 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
VPS13C-207ENST00000558919 MROH7-TTC4A0A0A0MT08 1334 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms