RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ATP1B2P14415 290 aaPredicted RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 ETS2P15036 469 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 CASP14P31944 242 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 IFNA8P32881 189 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 NOVP48745 357 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ARRB1P49407 418 aaPredicted RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 RPS14P62263 151 aaKnown RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 CSNK1G2P78368 415 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ORC2Q13416 577 aaPredicted RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 DGUOKQ16854 277 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 MARCH8Q5T0T0 291 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ARMC12Q5T9G4 340 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 SCARA5Q6ZMJ2 495 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ZNF571Q7Z3V5 609 aaPredicted RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 ECHDC2Q86YB7 292 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 PRR22Q8IZ63 422 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 SPATA4Q8NEY3 305 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 KCNG3Q8TAE7 436 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 SETD7Q8WTS6 366 aaKnown RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 P2RY13Q9BPV8 354 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 MFFQ9GZY8 342 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 GBA3Q9H227 469 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 SLC25A22Q9H936 323 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 MRPL47Q9HD33 250 aaKnown RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 GLRX2Q9NS18 164 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 KCNIP1Q9NZI2 227 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 STAP1Q9ULZ2 295 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 CFAP65Q6ZU64 1925 aaKnown RBP3.21□□□□□ -1.9
CASC4-206ENST00000558847 A0A1W2PPE3 182 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 E9PBE3 544 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 SGK1O00141 431 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 HSD17B6O14756 317 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 HDAC3O15379 428 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 SOX15O60248 233 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 FGF1P05230 155 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 FDFT1P37268 417 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 VHLP40337 213 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 TPMTP51580 245 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 RPS8P62241 208 aaKnown RBP3.2□□□□□ -1.9
CASC4-206ENST00000558847 ZNF77Q15935 545 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 GPRC6AQ5T6X5 926 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 FHL5Q5TD97 284 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 TMEM107Q6UX40 140 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 TMIGD1Q6UXZ0 262 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 Q6ZN92 141 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 BBS5Q8N3I7 341 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 OR2L5Q8NG80 312 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 OR52I1Q8NGK6 324 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 CHCHD10Q8WYQ3 142 aaPredicted RBP3.2□□□□□ -1.9
CASC4-206ENST00000558847 UCN3Q969E3 161 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.2□□□□□ -1.9
CASC4-206ENST00000558847 MARC2Q969Z3 335 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 PLEKHA8Q96JA3 519 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 MRPL45Q9BRJ2 306 aaKnown RBP3.2□□□□□ -1.9
CASC4-206ENST00000558847 NARFLQ9H6Q4 476 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 VPS37BQ9H9H4 285 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 KLHL28Q9NXS3 571 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 KIF25Q9UIL4 384 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 KCNIP3Q9Y2W7 256 aa3.2□□□□□ -1.9
CASC4-206ENST00000558847 A0A0G2JRQ6 117 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 FOXE1O00358 373 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 ZNF780AO75290 641 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 MMP23AO75900 390 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 ERLIN2O94905 339 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 KRT14P02533 472 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 MMP1P03956 469 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 P04436 131 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 C2P06681 752 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 NPR2P20594 1047 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 ATP6V1B2P21281 511 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 COX7A1P24310 79 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 PRDX3P30048 256 aaKnown RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 TNNT2P45379 298 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 KLK7P49862 253 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 DLX1P56177 255 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 KCNJ2P63252 427 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 ARHGAP19Q14CB8 494 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 C1orf100Q5SVJ3 147 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 OR2G6Q5TZ20 316 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 PEX26Q7Z412 305 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 FAM220AQ7Z4H9 259 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 PSTKQ8IV42 348 aaKnown RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 RAB3IL1Q8TBN0 382 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 FGF11Q92914 225 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 C16orf74Q96GX8 76 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 TSNARE1Q96NA8 513 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 KCTD14Q9BQ13 255 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 AIG1Q9NVV5 245 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 GIN1Q9NXP7 522 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 ADAM22Q9P0K1 906 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 PSMC3IPQ9P2W1 217 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 NAP1L2Q9ULW6 460 aaPredicted RBP3.19□□□□□ -1.9
CASC4-206ENST00000558847 TRAF3IP3Q9Y228 551 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
CASC4-206ENST00000558847 A6NIZ1 184 aa3.18□□□□□ -1.9
CASC4-206ENST00000558847 GFYI3L273 518 aa3.18□□□□□ -1.9
CASC4-206ENST00000558847 AGPAT2O15120 278 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms