RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PELI1Q96FA3 418 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 PGLYRP3Q96LB9 341 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 NPAS1Q99742 590 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 CTRCQ99895 268 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 APMAPQ9HDC9 416 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 B3GAT2Q9NPZ5 323 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 TRAPPC4Q9Y296 219 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 CPNE3O75131 537 aaKnown RBP9.61□□□□□ -0.87
TPM1-210ENST00000558264 CFIP05156 583 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 RPS4XP62701 263 aaKnown RBP9.61□□□□□ -0.87
TPM1-210ENST00000558264 RPL18Q07020 188 aaKnown RBP9.61□□□□□ -0.87
TPM1-210ENST00000558264 SLC25A35Q3KQZ1 300 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 ACSM3Q53FZ2 586 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 JAZF1Q86VZ6 243 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 ZNF440Q8IYI8 595 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 HOXD1Q9GZZ0 328 aa9.61□□□□□ -0.87
TPM1-210ENST00000558264 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
TPM1-210ENST00000558264 ING1Q9UK53 422 aaPredicted RBP9.61□□□□□ -0.87
TPM1-210ENST00000558264 A8MV72 311 aaPredicted RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 PATE3B3GLJ2 98 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 RPP14O95059 124 aaKnown RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 PNMTP11086 282 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 ELK1P19419 428 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 EPHA8P29322 1005 aaPredicted RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 PWWP2BQ6NUJ5 590 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 NANOGNBQ7Z5D8 188 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 OR1N1Q8NGS0 311 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 HSD17B8Q92506 261 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 C8orf44Q96CB5 159 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 GUCD1Q96NT3 240 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 OR11A1Q9GZK7 315 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 C11orf54Q9H0W9 315 aaPredicted RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 KCNN2Q9H2S1 579 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 EVA1AQ9H8M9 152 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 AKIRIN1Q9H9L7 192 aaPredicted RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 ST6GALNAC2Q9UJ37 374 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 KLHL21Q9UJP4 597 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 POLHQ9Y253 713 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 RASD1Q9Y272 281 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 CACNA1CQ13936 2221 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 TTC36A6NLP5 189 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 PLPP2O43688 288 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 TSPAN2O60636 221 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 AHCYP23526 432 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 CXCR1P25024 350 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 EDNRAP25101 427 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 DIO1P49895 249 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 GDI2P50395 445 aaKnown RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 PPP3R1P63098 170 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 BDH1Q02338 343 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 SELENBP1Q13228 472 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 RNASE12Q5GAN4 147 aaKnown RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 BICRALQ6AI39 1079 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 XKRXQ6PP77 449 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 WDR74Q6RFH5 385 aaPredicted RBP9.6□□□□□ -0.87
TPM1-210ENST00000558264 PRSS42Q7Z5A4 293 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 SLITRK4Q8IW52 837 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 EID2Q8N6I1 236 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 OR14A16Q8NHC5 309 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 DUSP19Q8WTR2 217 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 SLC35B4Q969S0 331 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 TMCO6Q96DC7 493 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 OR14A2Q96R54 314 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 ALG12Q9BV10 488 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 GALNT9Q9HCQ5 603 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 INPP5EQ9NRR6 644 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 KLHDC2Q9Y2U9 406 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 ZDBF2Q9HCK1 2354 aa9.6□□□□□ -0.87
TPM1-210ENST00000558264 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 TRBV2A0A0J9YWF9 115 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 FBXW4P57775 412 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 PRPS1P60891 318 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 ACTC1P68032 377 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 ACTA1P68133 377 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 ZSWIM7Q19AV6 140 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 HLA-BQ31612 363 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 DMKNQ6E0U4 476 aaPredicted RBP9.59□□□□□ -0.87
TPM1-210ENST00000558264 LCN10Q6JVE6 187 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 FAM122BQ7Z309 247 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 GPALPP1Q8IXQ4 340 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 Q8N402 240 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 SAMD12Q8N8I0 201 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 IL17RDQ8NFM7 739 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 TSPAN32Q96QS1 320 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 DDOQ99489 341 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 HAO2Q9NYQ3 351 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 NCDNQ9UBB6 729 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 MRTO4Q9UKD2 239 aaKnown RBP9.59□□□□□ -0.87
TPM1-210ENST00000558264 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 HIF3AQ9Y2N7 669 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 U3KQA8 63 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 A0A0G2JMP0 313 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 A0A0X1KG70 313 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 A0A1B0GTH9 108 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 TMEM72A0PK05 275 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 SCRG1O75711 98 aa9.59□□□□□ -0.87
TPM1-210ENST00000558264 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
TPM1-210ENST00000558264 CD14P08571 375 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms