RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EXD2Q9NVH0 621 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OXSMQ9NWU1 459 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 BAIAP2L1Q9UHR4 511 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZNF180Q9UJW8 692 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 MKLN1Q9UL63 735 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SLC35A3Q9Y2D2 325 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TMED5Q9Y3A6 229 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 CCL27Q9Y4X3 112 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 NOX1Q9Y5S8 564 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TMED7-TICAM2A0A0A6YYA0 188 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 IGHV2OR16-5A0A0B4J2B6 119 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TMEM229AB2RXF0 380 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TMEM114B3SHH9 223 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 WNT9BO14905 357 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 CFLARO15519 480 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 FCMRO60667 390 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 UGT2B17O75795 530 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ALX3O95076 343 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 AKR7A3O95154 331 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 AGR2O95994 175 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 CHEK2O96017 543 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GPIP06744 558 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GUSBP08236 651 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 IGFBP1P08833 259 aaPredicted RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 NUDT17P0C025 328 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 LAMP1P11279 417 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 IMPDH2P12268 514 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ADRA2CP18825 462 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 SDC1P18827 310 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TCN1P20061 433 aaPredicted RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 GCH1P30793 250 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GLRXP35754 106 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 IDH2P48735 452 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 POLR2HP52434 150 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 SELENOVP59797 346 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TEKQ02763 1124 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ZP4Q12836 540 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 NPRL3Q12980 569 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 BAMBIQ13145 260 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 SNTB2Q13425 540 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 CEACAM7Q14002 265 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TRMT5Q32P41 509 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 ATAD3BQ5T9A4 648 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 AP1ARQ63HQ0 302 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 KRT80Q6KB66 452 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 NIPAL3Q6P499 406 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ZDHHC24Q6UX98 284 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TIFABQ6ZNK6 161 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 C16orf62Q7Z3J2 963 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GPAT4Q86UL3 456 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 RELL1Q8IUW5 271 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ARFGAP2Q8N6H7 521 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 SIGLECL1Q8N7X8 197 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TMEM99Q8N816 258 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 CLHC1Q8NHS4 586 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 PSMA8Q8TAA3 256 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 SFXN5Q8TD22 340 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 SLC25A28Q96A46 364 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 FCRL1Q96LA6 429 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ZNF385AQ96PM9 386 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 TAPBPLQ9BX59 468 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 FUT8Q9BYC5 575 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 MRPL37Q9BZE1 423 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 LINC00470Q9BZP3 86 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ZNF385DQ9H6B1 395 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 CRLF2Q9HC73 371 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 POLE3Q9NRF9 147 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ATAD3AQ9NVI7 634 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GPATCH2Q9NW75 528 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 NINJ2Q9NZG7 142 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 TESQ9UGI8 421 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 DCDC2Q9UHG0 476 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ATP6V1HQ9UI12 483 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 GPR160Q9UJ42 338 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 OSGIN1Q9UJX0 560 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 ZNF346Q9UL40 294 aaKnown RBP4.45□□□□□ -1.7
SPG11-208ENST00000558155 TMED7Q9Y3B3 224 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 CORINQ9Y5Q5 1042 aa4.45□□□□□ -1.7
SPG11-208ENST00000558155 A0A1B0GUS0 222 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 TMEM72A0PK05 275 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 LIPT2A6NK58 231 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 AQP7P3A6NL99 342 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RPL36A-HNRNPH2H7BZ11 118 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 SCN2BO60939 215 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 LYPLA1O75608 230 aaPredicted RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 UPK3AO75631 287 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 C6orf47O95873 294 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 CELA3BP08861 270 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 LINC00032P0C843 101 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 MYL2P10916 166 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 NEFHP12036 1026 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 BCKDHAP12694 445 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 UQCRBP14927 111 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 CXCR1P25024 350 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 MAPK1P28482 360 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 TACR3P29371 465 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RAD52P43351 418 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 ALDH3B1P43353 468 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 MAP2K3P46734 347 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms