RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 FAPQ12884 760 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 KRT72Q14CN4 511 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 PDK3Q15120 406 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 TSC22D1Q15714 1073 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 NPTX1Q15818 432 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 NIPAL3Q6P499 406 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 ABHD12BQ7Z5M8 362 aaPredicted RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 VTCN1Q7Z7D3 282 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 KDM8Q8N371 416 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 FAM156AQ8NDB6 213 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 STEAP2Q8NFT2 490 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 OR9K2Q8NGE7 335 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 OR4D11Q8NGI4 311 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 ZNF417Q8TAU3 575 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 TAAR8Q969N4 342 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 MCUR1Q96AQ8 359 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 PIK3IP1Q96FE7 263 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 ZNF587Q96SQ5 575 aaPredicted RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 CDRT15Q96T59 188 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 FNDC11Q9BVV2 318 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 SF3B5Q9BWJ5 86 aaKnown RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 HDHD5Q9BXW7 423 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 POLR2J2Q9GZM3 115 aaKnown RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 POLR2J3Q9H1A7 115 aaKnown RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 ASB6Q9NWX5 421 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 ABCD2Q9UBJ2 740 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 MAGEL2Q9UJ55 1249 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 SAMD4AQ9UPU9 718 aaKnown RBP7.97□□□□□ -1.13
SPG11-207ENST00000558138 RASD1Q9Y272 281 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 GPR52Q9Y2T5 361 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 FLVCR1Q9Y5Y0 555 aa7.97□□□□□ -1.13
SPG11-207ENST00000558138 PKDREJQ9NTG1 2253 aa7.96□□□□□ -1.13
SPG11-207ENST00000558138 MPDZO75970 2070 aa7.96□□□□□ -1.13
SPG11-207ENST00000558138 IGKV3D-15A0A087WSY6 115 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ZNF716A6NP11 495 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 C11orf98E9PRG8 122 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 RAD51DO75771 328 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 OR5F1O95221 314 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CH25HO95992 272 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ADORA3P0DMS8 318 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CDH2P19022 906 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 CRYBA2P53672 197 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 SLC16A1P53985 500 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CLDN17P56750 224 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 POU3F1Q03052 451 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 EGR4Q05215 589 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ST3GAL3Q11203 375 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ITGADQ13349 1161 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 PIN1Q13526 163 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 SLC17A1Q14916 467 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 P2RY6Q15077 328 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 C9orf135Q5VTT2 229 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CARD17Q5XLA6 110 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 FBXW9Q5XUX1 488 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 C8orf82Q6P1X6 216 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 KLHL24Q6TFL4 600 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 Q6ZT83 130 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 H1FNTQ75WM6 255 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 RRM2BQ7LG56 351 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 BHLHA15Q7RTS1 189 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 NANOGNBQ7Z5D8 188 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 UEVLDQ8IX04 471 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 S100PBPQ96BU1 408 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 MPP4Q96JB8 637 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 PRRC1Q96M27 445 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 NSMCE2Q96MF7 247 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 WFIKKN1Q96NZ8 548 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 TMEM43Q9BTV4 400 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 PTDSS2Q9BVG9 487 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 RSPO3Q9BXY4 272 aaPredicted RBP7.96□□□□□ -1.14
SPG11-207ENST00000558138 NANSQ9NR45 359 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 RHCGQ9UBD6 479 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 RIMS3Q9UJD0 308 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 ITGB1BP2Q9UKP3 347 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 EDARQ9UNE0 448 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 MED31Q9Y3C7 131 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 TESMINQ9Y4I5 508 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CORINQ9Y5Q5 1042 aa7.96□□□□□ -1.14
SPG11-207ENST00000558138 CACNA1DQ01668 2161 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 IGKV1D-42A0A075B6H8 117 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 ZNF726A6NNF4 738 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 CYSRT1A8MQ03 144 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 ZNF587BE7ETH6 402 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 RNF13O43567 381 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 NPIPB7O75200 414 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 SLC43A1O75387 559 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 MT-ATP6P00846 226 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 CCKARP32238 428 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 MSX2P35548 267 aaPredicted RBP7.95□□□□□ -1.14
SPG11-207ENST00000558138 H3F3AP84243 136 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 TGFBR3Q03167 851 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 SFRP5Q5T4F7 317 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 HMBOX1Q6NT76 420 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 STAC2Q6ZMT1 411 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 ZNF730Q6ZMV8 503 aa7.95□□□□□ -1.14
SPG11-207ENST00000558138 TRPM8Q7Z2W7 1104 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms