RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KRCC1Q9NPI7 259 aaPredicted RBP18.99■□□□□ 0.63
CASC4-204ENST00000557945 KLHL13Q9P2N7 655 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 DNAJB9Q9UBS3 223 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 SEC14L4Q9UDX3 406 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 CLEC4AQ9UMR7 237 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 CLOCKO15516 846 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 CYTIPO60759 359 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 E2F6O75461 281 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 RCBTB2O95199 551 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 TMIGD3P0DMS9 266 aaPredicted RBP18.98■□□□□ 0.63
CASC4-204ENST00000557945 FUT1P19526 365 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 GPR4P46093 362 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 HMGA2P52926 109 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 CTBP2P56545 445 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 H3F3AP84243 136 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 IL1RL1Q01638 556 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 PRKCDQ05655 676 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 RASGEF1BQ0VAM2 473 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 PMS2P3Q13401 168 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 RNPS1Q15287 305 aaKnown RBP18.98■□□□□ 0.63
CASC4-204ENST00000557945 TMEM225Q6GV28 225 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 ZFP1Q6P2D0 407 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 H1FNTQ75WM6 255 aaPredicted RBP18.98■□□□□ 0.63
CASC4-204ENST00000557945 SLC46A3Q7Z3Q1 461 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 OR4C15Q8NGM1 316 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 CCDC120Q96HB5 630 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 CHST11Q9NPF2 352 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 TMEM5Q9Y2B1 443 aa18.98■□□□□ 0.63
CASC4-204ENST00000557945 HTR3EA5X5Y0 456 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 AQP7P3A6NL99 342 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 OR10H3O60404 316 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 RAMP1O60894 148 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 DEAF1O75398 565 aaPredicted RBP18.97■□□□□ 0.63
CASC4-204ENST00000557945 CCNB2O95067 398 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 LDLRP01130 860 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 IGF2P01344 180 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 SAGP10523 405 aaPredicted RBP18.97■□□□□ 0.63
CASC4-204ENST00000557945 FCGR1AP12314 374 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 MAKP20794 623 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 FASP25445 335 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 CEACAM8P31997 349 aaPredicted RBP18.97■□□□□ 0.63
CASC4-204ENST00000557945 LIMS1P48059 325 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 IST1P53990 364 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 LAPTM4AQ15012 233 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 GPAT4Q86UL3 456 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 STMN2Q93045 179 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 FAM46AQ96IP4 442 aaKnown RBP18.97■□□□□ 0.63
CASC4-204ENST00000557945 ZFP3Q96NJ6 502 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 KLHL9Q9P2J3 617 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 ERRFI1Q9UJM3 462 aaPredicted RBP18.97■□□□□ 0.63
CASC4-204ENST00000557945 ZNF229Q9UJW7 825 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 B3GALT5Q9Y2C3 310 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 HIVEP3Q5T1R4 2406 aa18.97■□□□□ 0.63
CASC4-204ENST00000557945 A0A0G2JNJ9 132 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 HSPB2A8KAH6 182 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 EFCAB9A8MZ26 197 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 RRP9O43818 475 aaKnown RBP18.96■□□□□ 0.63
CASC4-204ENST00000557945 OR6A2O95222 327 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 IFNGR2P38484 337 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 HSPB2Q16082 182 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 ABLIM2Q6H8Q1 611 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 NANOGNBQ7Z5D8 188 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 CCDC71Q8IV32 467 aaPredicted RBP18.96■□□□□ 0.63
CASC4-204ENST00000557945 CNEP1R1Q8N9A8 125 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 SCAIQ8N9R8 606 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 NAXEQ8NCW5 288 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 OR5J2Q8NH18 312 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 MRPL39Q9NYK5 338 aaKnown RBP18.96■□□□□ 0.63
CASC4-204ENST00000557945 Q9UFV3 132 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 RASD1Q9Y272 281 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 ARHGAP21Q5T5U3 1957 aa18.96■□□□□ 0.63
CASC4-204ENST00000557945 PHF3Q92576 2039 aaKnown RBP18.96■□□□□ 0.63
CASC4-204ENST00000557945 FZD7O75084 574 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 DNAJA1P31689 397 aaKnown RBP18.95■□□□□ 0.62
CASC4-204ENST00000557945 OMPP47874 163 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 P2RY4P51582 365 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 SMSP52788 366 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 SIRPAP78324 504 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 ADORA2A-AS1P86434 159 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 FOXF2Q12947 444 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 ATP6AP1Q15904 470 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 AMIGO2Q86SJ2 522 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 KDM8Q8N371 416 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 LINC00471Q8N535 108 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 OR9Q2Q8NGE9 314 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 LRTOMTQ8WZ04 291 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 ZNF775Q96BV0 537 aaPredicted RBP18.95■□□□□ 0.62
CASC4-204ENST00000557945 GMPPAQ96IJ6 420 aaPredicted RBP18.95■□□□□ 0.62
CASC4-204ENST00000557945 S100A14Q9HCY8 104 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 GLRX2Q9NS18 164 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 COQ3Q9NZJ6 369 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 RNF6Q9Y252 685 aa18.95■□□□□ 0.62
CASC4-204ENST00000557945 PLPP3O14495 311 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 AGFG2O95081 481 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 ASAH2BP0C7U1 165 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 ADORA3P0DMS8 318 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 AHCYP23526 432 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 CTSSP25774 331 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 GK3PQ14409 553 aa18.94■□□□□ 0.62
CASC4-204ENST00000557945 MICAQ29983 383 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms