RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 YY1AP1Q9H869 796 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 KRCC1Q9NPI7 259 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF229Q9UJW7 825 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 PROCRQ9UNN8 238 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 ADGRG4Q8IZF6 3080 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF716A6NP11 495 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 KDM4EB2RXH2 506 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-234ENST00000557703 AKAP8O43823 692 aaKnown RBP12.19□□□□□ -0.46
SHMT2-234ENST00000557703 THY1P04216 161 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 FABP3P05413 133 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 MAGEA2P43356 314 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 RPS5P46782 204 aaKnown RBP12.19□□□□□ -0.46
SHMT2-234ENST00000557703 CHRNB3Q05901 458 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 TFF3Q07654 80 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 FOXF2Q12947 444 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 LIX1LQ8IVB5 337 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 ACBD4Q8NC06 268 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-234ENST00000557703 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 DHRS1Q96LJ7 313 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 OXGR1Q96P68 337 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 PRSS27Q9BQR3 290 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 HDHD5Q9BXW7 423 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 NANSQ9NR45 359 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 KIAA1549Q9HCM3 1950 aa12.19□□□□□ -0.46
SHMT2-234ENST00000557703 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 PRSS23O95084 383 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 GOSR1O95249 250 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 BGLAPP02818 100 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 H1F0P07305 194 aaKnown RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 RAP2AP10114 183 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 MSX2P35548 267 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 OR3A2P47893 321 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 HMGA2P52926 109 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 CBX1P83916 185 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 MS4A2Q01362 244 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 ZP4Q12836 540 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 FLOT2Q14254 428 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 P2RY6Q15077 328 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TAF11Q15544 211 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF74Q16587 644 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 IQCCQ4KMZ1 466 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 NCCRP1Q6ZVX7 275 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 BTLAQ7Z6A9 289 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TUSC5Q8IXB3 177 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TMEM99Q8N816 258 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 ANKK1Q8NFD2 765 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 OR5J2Q8NH18 312 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 CADM1Q9BY67 442 aaKnown RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 ENKD1Q9H0I2 346 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 C6orf203Q9P0P8 240 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 PLEKHB1Q9UF11 243 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 ING1Q9UK53 422 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-234ENST00000557703 RCE1Q9Y256 329 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TMEM5Q9Y2B1 443 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
SHMT2-234ENST00000557703 TCRBV5S2A0A599 114 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 EEF1E1-BLOC1S5C9J1V9 151 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 FFAR1O14842 300 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 EEF1E1O43324 174 aaKnown RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 MRPL33O75394 65 aaKnown RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 PDE5AO76074 875 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 AKR7A3O95154 331 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 PPP3CBP16298 524 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF43P17038 809 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 IGFBP2P18065 325 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 GRPRP30550 384 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 IFNGR2P38484 337 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 SLC9A3P48764 834 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 P2RY4P51582 365 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 VLDLRP98155 873 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 PUDPQ08623 228 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 CYP2R1Q6VVX0 501 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 MBOAT2Q6ZWT7 520 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ASRGL1Q7L266 308 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 HDDC2Q7Z4H3 204 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ABHD12BQ7Z5M8 362 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 TSPYL5Q86VY4 417 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ZDHHC21Q8IVQ6 265 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 POMGNT2Q8NAT1 580 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 OR9K2Q8NGE7 335 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 SLC25A36Q96CQ1 311 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 RBM24Q9BX46 236 aaKnown RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 NDEL1Q9GZM8 345 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 STX18Q9P2W9 335 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms