RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 GOSR1O95249 250 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 EPPINO95925 133 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 FTH1P02794 183 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CCDC166P0CW27 439 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 POU2F1P14859 743 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 TCF4P15884 667 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 TNNI3P19429 210 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PTNP21246 168 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CNR1P21554 472 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 GDF1P27539 372 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PKLRP30613 574 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 RPA3P35244 121 aaPredicted RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 PRLHRP49683 370 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 KLK7P49862 253 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CDH13P55290 713 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 TMEM50BP56557 158 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 DYNLT1P63172 113 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 GBE1Q04446 702 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 RPA4Q13156 261 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PTK6Q13882 451 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 RCAN2Q14206 197 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 FASTKD3Q14CZ7 662 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 HADHQ16836 314 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 TMEM249Q2WGJ8 235 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 UGT3A2Q3SY77 523 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 C9orf152Q5JTZ5 239 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 FAM120AOSQ5T036 256 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PRAMEF20Q5VT98 475 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 NCBP2-AS2Q69YL0 99 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CFAP161Q6P656 301 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SLC25A47Q6Q0C1 308 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CLEC2AQ6UVW9 174 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SUSD1Q6UWL2 747 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PRSS41Q7RTY9 318 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PID1Q7Z2X4 250 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 P4HA3Q7Z4N8 544 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SERPINA9Q86WD7 417 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PHF13Q86YI8 300 aaPredicted RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 PSTKQ8IV42 348 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 CCDC50Q8IVM0 306 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 MCOLN2Q8IZK6 566 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 FAM89BQ8N5H3 189 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SNX31Q8N9S9 440 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 THAP8Q8NA92 274 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 LINC01555Q8NAE3 123 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 OR13C4Q8NGS5 318 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 HEXDCQ8WVB3 486 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 GTF3AQ92664 365 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 ULK4Q96C45 1275 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 THOC1Q96FV9 657 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 IMP4Q96G21 291 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 LINC00615Q96LM1 132 aaPredicted RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 TRABDQ9H4I3 376 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 IL1RL2Q9HB29 575 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 DEPPQ9NTK1 212 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 UTP6Q9NYH9 597 aaKnown RBP3.17□□□□□ -1.9
CHD8-212ENST00000557329 HAO2Q9NYQ3 351 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 FAM153AQ9UHL3 310 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PCDHGB4Q9UN71 923 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 PPP1R3CQ9UQK1 317 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 LIPT1Q9Y234 373 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 WIF1Q9Y5W5 379 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SMAD5-AS1Q9Y6J3 95 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SCN3AQ9NY46 2000 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 SVEP1Q4LDE5 3571 aa3.17□□□□□ -1.9
CHD8-212ENST00000557329 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 USF3Q68DE3 2245 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 HRNRQ86YZ3 2850 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 IGHV4-30-2A0A087WSY4 118 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 IQCMA0A1B0GVH7 501 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 PSMD12O00232 456 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 TXNDC9O14530 226 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 LIN7AO14910 233 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 ACSL3O95573 720 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 AGTP01019 485 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TGFAP01135 160 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 IFNA16P05015 189 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 FHP07954 510 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 OR56A5P0C7T3 313 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TPBGLP0DKB5 382 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 PIK3R1P27986 724 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 SOX3P41225 446 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 HNF4AP41235 474 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 BDKRB1P46663 353 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 BTG2P78543 158 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 GGTLC2Q14390 218 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 CAPRIN1Q14444 709 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 EFTUD2Q15029 972 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD8-212ENST00000557329 DPYSL2Q16555 572 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 ACSF3Q4G176 576 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 IQCCQ4KMZ1 466 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 KCTD11Q693B1 232 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 FAM166AQ6J272 317 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 CHMP1BQ7LBR1 199 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 KRT74Q7RTS7 529 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 OTOAQ7RTW8 1153 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 SNX20Q7Z614 316 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms