RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CHST2Q9Y4C5 530 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 OR6C65A6NJZ3 312 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 KLF11O14901 512 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-213ENST00000557262 NPIPB7O75200 414 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 RGNQ15493 299 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 TMEM249Q2WGJ8 235 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 CHRFAM7AQ494W8 412 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 GTDC1Q4AE62 458 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 HIKESHIQ53FT3 197 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF311Q5JNZ3 666 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 RPS26P11Q5JNZ5 115 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-213ENST00000557262 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF525Q8N782 197 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 PROX1Q92786 737 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 VPS33AQ96AX1 596 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 C3orf49Q96BT1 292 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 OR52B2Q96RD2 323 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 BCL2L10Q9HD36 194 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 NKIRAS1Q9NYS0 192 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 RASD1Q9Y272 281 aa13.88□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF587BE7ETH6 402 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 FRS3O43559 492 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 F12P00748 615 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-213ENST00000557262 SELENOPP49908 381 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 VLDLRP98155 873 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 SWI5Q1ZZU3 235 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 TBRG1Q3YBR2 411 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 PRAMEF8Q5VWM4 474 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 PRAMEF7Q5VXH5 474 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 MAVSQ7Z434 540 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 SERPINA11Q86U17 422 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 EPHX4Q8IUS5 362 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 MIER2Q8N344 545 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 OR9I1Q8NGQ6 314 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 OR1K1Q8NGR3 316 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 MFSD8Q8NHS3 518 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 SLC35B4Q969S0 331 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 SLC25A36Q96CQ1 311 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 RAD21L1Q9H4I0 556 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 PCDHB14Q9Y5E9 798 aa13.87□□□□□ -0.19
TUBB3-213ENST00000557262 TMEM229AB2RXF0 380 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 CLIC1O00299 241 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 AHSA1O95433 338 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 LGI1O95970 557 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 CSF3P09919 207 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 UBE2NP61088 152 aaKnown RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 MAGOHP61326 146 aaKnown RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 C6orf52Q5T4I8 152 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 NIPAL3Q6P499 406 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 GTF2H4Q92759 462 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 BCL2L2Q92843 193 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 FBXO17Q96EF6 278 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF317Q96PQ6 595 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 SLC38A2Q96QD8 506 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 KCNS3Q9BQ31 491 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 LINC00470Q9BZP3 86 aa13.86□□□□□ -0.19
TUBB3-213ENST00000557262 PAIP1Q9H074 479 aaKnown RBP13.86□□□□□ -0.19
TUBB3-213ENST00000557262 ARPC4-TTLL3A0A0A6YYG9 625 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 IGHV1-18A0A0C4DH31 117 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 FTCDNL1E5RQL4 147 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 UPK3AO75631 287 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 CRYAAP02489 173 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 NUDT7P0C024 238 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 BMP2P12643 396 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-213ENST00000557262 RPS5P46782 204 aaKnown RBP13.85□□□□□ -0.19
TUBB3-213ENST00000557262 HOXC5Q00444 222 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 EGR4Q05215 589 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 LGALS3BPQ08380 585 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 FADDQ13158 208 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 CYB5R2Q6BCY4 276 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 ANKRD16Q6P6B7 361 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 EPGNQ6UW88 154 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 KDM8Q8N371 416 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 MAGEE2Q8TD90 523 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-213ENST00000557262 TLCD1Q96CP7 247 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 KATNB1Q9BVA0 655 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
TUBB3-213ENST00000557262 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 OR2T1O43869 369 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 PNMTP11086 282 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 ETS2P15036 469 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 ZNF43P17038 809 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 USF1P22415 310 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-213ENST00000557262 SERPINF1P36955 418 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 CLDN17P56750 224 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 LSM11P83369 360 aaKnown RBP eCLIP13.84□□□□□ -0.19
TUBB3-213ENST00000557262 C3orf36Q3SXR2 165 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 SLC2A7Q6PXP3 512 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 LINGO2Q7L985 606 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 BBS10Q8TAM1 723 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 MAL2Q969L2 176 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms