RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 TXNL4BQ9NX01 149 aaKnown RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 NKIRAS2Q9NYR9 191 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 NUFIP1Q9UHK0 495 aaKnown RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 TEKT2Q9UIF3 430 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 NUP50Q9UKX7 468 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 SLC22A14Q9Y267 594 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 PPIL1Q9Y3C6 166 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 CLDN16Q9Y5I7 305 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 CACNA1GO43497 2377 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ANAPC1Q9H1A4 1944 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PLXNA4Q9HCM2 1894 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 C17orf113A0A1B0GUU1 675 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 TRDV1A0A1B0GX56 115 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1W2PRB8 838 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 LINC00862A6NCI5 91 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 C12orf71A8MTZ7 269 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 F5H0A9 414 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 H3BN98 237 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 K7ERQ8 282 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PLA2G10O15496 165 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 LYRM1O43325 122 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 TNFSF14O43557 240 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR10H3O60404 316 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PSIP1O75475 530 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SLCO2B1O94956 709 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OLFM2O95897 454 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 DHFRP00374 187 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 HLA-DPB1P04440 258 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 H1F0P07305 194 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ACP2P11117 423 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 NAGAP17050 411 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 C4BPBP20851 252 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ELAVL4P26378 380 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SOAT1P35610 550 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 IFNGR2P38484 337 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SOX3P41225 446 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CSKP41240 450 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR1E2P47887 323 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 STK19P49842 368 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SMSP52788 366 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CRISP3P54108 245 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ATP12AP54707 1039 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PRMT2P55345 433 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 WNT4P56705 351 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 DCDC1P59894 354 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SNRPD1P62314 119 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 POLR2LP62875 67 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ACSM1Q08AH1 577 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CNTN1Q12860 1018 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 DDX39BQ13838 428 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 TATDN3Q17R31 274 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 WSCD2Q2TBF2 565 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 KLHL12Q53G59 568 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 LIPKQ5VXJ0 399 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 FAM71E1Q6IPT2 247 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CD200R1LQ6Q8B3 271 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 AGTRAPQ6RW13 159 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SLC36A4Q6YBV0 504 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 FAM83HQ6ZRV2 1179 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 C18orf65Q6ZTR6 163 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 GET4Q7L5D6 327 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PRSS45Q7RTY3 260 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ANKRD33Q7Z3H0 272 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 TMCO2Q7Z6W1 182 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 DEFB128Q7Z7B8 93 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 APCDD1Q8J025 514 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CADM2Q8N3J6 435 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 Q8N402 240 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CPXM2Q8N436 756 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 LRRC17Q8N6Y2 441 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 GPR26Q8NDV2 337 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR7G3Q8NG95 312 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR2AP1Q8NGE2 309 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR5H6Q8NGV6 325 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR14A16Q8NHC5 309 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 VANGL1Q8TAA9 524 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF461Q8TAF7 563 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OR5P2Q8WZ92 322 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ELMO1Q92556 727 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 MAL2Q969L2 176 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 OTULINQ96BN8 352 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 WDR34Q96EX3 536 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SCRN2Q96FV2 425 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PDXPQ96GD0 296 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 MTERF1Q99551 399 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 P2RY13Q9BPV8 354 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 SOSTQ9BQB4 213 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 MARVELD1Q9BSK0 173 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 WRAP53Q9BUR4 548 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 POLR2J3Q9H1A7 115 aaKnown RBP4.29□□□□□ -1.72
ATXN3-246ENST00000557030 ABCG8Q9H221 673 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 MMP28Q9H239 520 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 GHITMQ9H3K2 345 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 PIGUQ9H490 435 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 C12orf10Q9HB07 376 aa4.29□□□□□ -1.72
ATXN3-246ENST00000557030 CD93Q9NPY3 652 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms