RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FKTNO75072 461 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ECDO95905 644 aaPredicted RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 HNRNPA1P09651 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRP54-213ENST00000556994 ERVK-25P63136 954 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 PDGFRLQ15198 375 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 C2orf68Q2NKX9 166 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 PRICKLE4Q2TBC4 344 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 DEFB115Q30KQ5 88 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TMEM81Q6P7N7 255 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 FAM198BQ6UWH4 519 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 GRAMD2AQ8IUY3 354 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 SAMD14Q8IZD0 417 aaPredicted RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 FAM71CQ8NEG0 241 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 OR14A16Q8NHC5 309 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 S100A16Q96FQ6 103 aaKnown RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 TSSK2Q96PF2 358 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 APOOQ9BUR5 198 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 KIR3DX1Q9H7L2 352 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 PLEKHA1Q9HB21 404 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 C12orf4Q9NQ89 552 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 STARD5Q9NSY2 213 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 BAIAP2Q9UQB8 552 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 CA5BQ9Y2D0 317 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 V9GY05 133 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 A0A1B0GTH9 108 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ANKRD20A5PA0PJZ0 165 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 MCRIP1C9JLW8 97 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ARPC5O15511 151 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 CREBL2O60519 120 aaPredicted RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 NDUFB2O95178 105 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 KAT7O95251 611 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TIMP1P01033 207 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 IGKV1D-16P01601 117 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 SMIM10L1P0DMW3 83 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 PVRP15151 417 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 IFNGR1P15260 489 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TYRP1P17643 537 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ADH7P40394 386 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 OR6V1Q8N148 313 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 NPEPL1Q8NDH3 523 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 OR52R1Q8NGF1 315 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 NT5CQ8TCD5 201 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 THEM6Q8WUY1 208 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TM4SF19Q96DZ7 209 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 SMIM10Q96HG1 83 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 SLC17A9Q9BYT1 436 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 AKAP7Q9P0M2 348 aaPredicted RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 KLF15Q9UIH9 416 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 ZNF281Q9Y2X9 895 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TICRRQ7Z2Z1 1910 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 TCRBV16S1A1N1A0A5B0 115 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 POM121BA6NF01 834 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 CHURC1-FNTBB4DL54 471 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 PYCARD-AS1I3L0S3 204 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 SUSD5O60279 629 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 SPI1P17947 270 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 DIO1P49895 249 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 SEC13P55735 322 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 AP3S2P59780 193 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
SRP54-213ENST00000556994 MGAT2Q10469 447 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 MELKQ14680 651 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 NNATQ16517 81 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 ODF4Q2M2E3 257 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 EXOSC6Q5RKV6 272 aaKnown RBP10.43□□□□□ -0.74
SRP54-213ENST00000556994 KIRREL2Q6UWL6 708 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 HDDC2Q7Z4H3 204 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 KCTD20Q7Z5Y7 419 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 POMGNT2Q8NAT1 580 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 ZNF511Q8NB15 262 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 OR5M1Q8NGP8 315 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 PPA2Q9H2U2 334 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 ZNF275Q9NSD4 429 aaPredicted RBP10.43□□□□□ -0.74
SRP54-213ENST00000556994 DNAJB12Q9NXW2 375 aaKnown RBP10.43□□□□□ -0.74
SRP54-213ENST00000556994 TAS2R5Q9NYW4 299 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 EMC3Q9P0I2 261 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 KIF25Q9UIL4 384 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 ENTPD2Q9Y5L3 495 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 MYO15AQ9UKN7 3530 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 SPEGQ15772 3267 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 EML5Q05BV3 1969 aa10.43□□□□□ -0.74
SRP54-213ENST00000556994 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 H0Y8X5 98 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 MAS1P04201 325 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 LPLP06858 475 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 OR8G3PP0DMU2 310 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 NAT1P18440 290 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 GJA4P35212 333 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 CAPZA2P47755 286 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 CBFBQ13951 182 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 HLXQ14774 488 aaPredicted RBP10.42□□□□□ -0.74
SRP54-213ENST00000556994 CSRP2Q16527 193 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 PRRT3Q5FWE3 981 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 ELFN2Q5R3F8 820 aa10.42□□□□□ -0.74
SRP54-213ENST00000556994 FCRL6Q6DN72 434 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms