RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ANKRD46Q86W74 232 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 CARM1Q86X55 608 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 CNPY4Q8N129 248 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 C4orf33Q8N1A6 199 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 OR4A15Q8NGL6 344 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF418Q8TF45 676 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 FAM216AQ8WUB2 273 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 CKAP2Q8WWK9 683 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM186Q96B77 213 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 ANKRD27Q96NW4 1050 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF317Q96PQ6 595 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 TXLNGYQ9BZA5 131 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 NELFAQ9H3P2 528 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 HIF1ANQ9NWT6 349 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 ADPRHL2Q9NX46 363 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 MID2Q9UJV3 735 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 TRRAPQ9Y4A5 3859 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 CFAP73A6NFT4 308 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 AGAP5A6NIR3 686 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 OR6C65A6NJZ3 312 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 RNASET2O00584 256 aaKnown RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 WNT9BO14905 357 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 NPHS1O60500 1241 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 C1QCP02747 245 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 SHBGP04278 402 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 MSMBP08118 114 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 CBR1P16152 277 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 ALDH3A1P30838 453 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 ARRB2P32121 409 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 P2RY4P51582 365 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 CLDN8P56748 225 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 HILS1P60008 231 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 ROR2Q01974 943 aaKnown RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 NPRL3Q12980 569 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 BNIP2Q12982 314 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 SCGB2A2Q13296 93 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 NIPAL3Q6P499 406 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 ZCCHC23Q6ZST2 131 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 CREB3L2Q70SY1 520 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 PEG10Q86TG7 708 aaKnown RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 EPHX4Q8IUS5 362 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 FAM169BQ8N8A8 192 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 MNS1Q8NEH6 495 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 CLDND2Q8NHS1 167 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 MAGEE2Q8TD90 523 aaPredicted RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 ANP32BQ92688 251 aaKnown RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 TUBGCP3Q96CW5 907 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 FAHD2AQ96GK7 314 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 MECRQ9BV79 373 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 PIF1Q9H611 641 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 MOV10Q9HCE1 1003 aaKnown RBP7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 GRIP1Q9Y3R0 1128 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 TGP01266 2768 aa7.79□□□□□ -1.16
HNRNPC-227ENST00000556897 PKD1L1Q8TDX9 2849 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 IGHV2OR16-5A0A0B4J2B6 119 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF503-AS2A6NEH8 195 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 TRIM77I1YAP6 450 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 HMGN4O00479 90 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 FAAHO00519 579 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 CPSF4O95639 269 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 SAGP10523 405 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 UQCRBP14927 111 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 CREB1P16220 341 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 TCN1P20061 433 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 EPHA1P21709 976 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 UQCRC2P22695 453 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 CXCR1P25024 350 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ARR3P36575 388 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 GPR6P46095 362 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 SH3BGRP55822 239 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ARF1P84077 181 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 EPS8Q12929 822 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 SNTB2Q13425 540 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 DAG1Q14118 895 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 AWAT1Q58HT5 328 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ELFN2Q5R3F8 820 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 MRPL2Q5T653 305 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 PRAMEF8Q5VWM4 474 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 PRAMEF7Q5VXH5 474 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 SAXO2Q658L1 398 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 KRT80Q6KB66 452 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 CMIPQ8IY22 773 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 IFT20Q8IY31 132 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ANKFN1Q8N957 763 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 EPS8L3Q8TE67 593 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 C16orf45Q96MC5 204 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 RBM4Q9BWF3 364 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 TAPBPLQ9BX59 468 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 RACGAP1Q9H0H5 632 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 NOX3Q9HBY0 568 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 CRLF2Q9HC73 371 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 RLIMQ9NVW2 624 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 TREM2Q9NZC2 230 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms