RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 ZNF563Q8TA94 476 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 LIPHQ8WWY8 451 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 IMMP1LQ96LU5 166 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 LMF1Q96S06 567 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NSG1A0A0A6YYJ2 146 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PTGES3LE9PB15 166 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HCRTR2O43614 444 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 XPNPEP2O43895 674 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CDK1P06493 297 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SAGP10523 405 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 COX6A1P12074 109 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SLC6A6P31641 620 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PRPS1P60891 318 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 EFNB1P98172 346 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RBPJQ06330 500 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TMED1Q13445 227 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SNAPC1Q16533 368 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 NTRK2Q16620 822 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 BTBD16Q32M84 506 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 KLHL22Q53GT1 634 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RNLSQ5VYX0 342 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OPN5Q6U736 354 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 WDR88Q6ZMY6 472 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 Q6ZPB1 254 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RTL4Q6ZR62 310 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ATG4DQ86TL0 474 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 KIF18BQ86Y91 864 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PRR22Q8IZ63 422 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 STX19Q8N4C7 294 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ST8SIA1Q92185 356 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 NRGNQ92686 78 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RORBQ92753 470 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HGDQ93099 445 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MUL1Q969V5 352 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 GPA33Q99795 319 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ADAM19Q9H013 955 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TNFRSF10DQ9UBN6 386 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 FBXL4Q9UKA2 621 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CARD8Q9Y2G2 431 aa12.89□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF99A8MXY4 864 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CDK2AP1O14519 115 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PRODHO43272 600 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PIP5K1CO60331 668 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SEC14L2O76054 403 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HPP00738 406 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SLC15A1P46059 708 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CCR4P51679 360 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 DLX5P56178 289 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 FOXL2P58012 376 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF117Q03924 483 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 INAQ16352 499 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 AHSA2Q719I0 299 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 BIVMQ86UB2 503 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 LNX2Q8N448 690 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TCEANCQ8N8B7 351 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR6S1Q8NH40 331 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 B4GALNT2Q8NHY0 566 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SPACA9Q96E40 222 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 DTNBP1Q96EV8 351 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CDCA4Q9BXL8 241 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MEPEQ9NQ76 525 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TVP23BQ9NYZ1 205 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 YARS2Q9Y2Z4 477 aaKnown RBP12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MXRA5Q9NR99 2828 aa12.88□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IGLV3-32A0A0A0MS00 114 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CDC42EP2O14613 210 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SURF4O15260 269 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IDH3BO43837 385 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PRKNO60260 465 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SLC19A2O60779 497 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ADAM11O75078 769 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR7A10O76100 309 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 NDUFB2O95178 105 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IFNGP01579 166 aa12.87□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HTR1AP08908 422 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms