RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ATG101Q9BSB4 218 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ADI1Q9BV57 179 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SNHG12Q9BXW3 62 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 LHPPQ9H008 270 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 PCDHAC1Q9H158 963 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 MED20Q9H944 212 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SPHK2Q9NRA0 654 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SEMA5BQ9P283 1151 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 STEAP1Q9UHE8 339 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FBXL4Q9UKA2 621 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 NENFQ9UMX5 172 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SLC35A3Q9Y2D2 325 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KLK4Q9Y5K2 254 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KIAA1210Q9ULL0 1709 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KDM5AP29375 1690 aaKnown RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 SLIT1O75093 1534 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PCM1Q15154 2024 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SIGLEC1Q9BZZ2 1709 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ADGRB1O14514 1584 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 NCAPD2Q15021 1401 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 TRAV8-7A0A075B6U6 113 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 TRAV39A0A0B4J263 110 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RNF212BA8MTL3 300 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 B4DXG7 233 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 TRIM49D1C9J1S8 452 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ACOT7O00154 380 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ADAP1O75689 374 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 IGSF6O95976 241 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 C1QCP02747 245 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 KLKB1P03952 638 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 NMBP08949 121 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PET100P0DJ07 73 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RD3LP0DJH9 198 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ZNF44P15621 663 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CRHBPP24387 322 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 HTR2CP28335 458 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SERPINA4P29622 427 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 MPLP40238 635 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RBM34P42696 430 aaKnown RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 MTNR1AP48039 350 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CSNK1A1P48729 337 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 TNFSF10P50591 281 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RAB8AP61006 207 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SHC2P98077 582 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SRSF4Q08170 494 aaKnown RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 PLA2G7Q13093 441 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 KLF10Q13118 480 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 DAG1Q14118 895 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 GRM4Q14833 912 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SURF2Q15527 256 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 HLFQ16534 295 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 OCIAD2Q56VL3 154 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 MESTQ5EB52 335 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 C9orf50Q5SZB4 431 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 LIPMQ5VYY2 423 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 XAF1Q6GPH4 301 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PRSS55Q6UWB4 352 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 SERPINA13PQ6UXR4 307 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CASP12Q6UXS9 341 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CD300LDQ6UXZ3 194 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 C15orf39Q6ZRI6 1047 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 MOB2Q70IA6 237 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 GAREM2Q75VX8 874 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 OAFQ86UD1 273 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SNX29P2Q8IUI4 249 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PI4KAP1Q8N8J0 262 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PNLDC1Q8NA58 520 aaKnown RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 OR13C4Q8NGS5 318 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 OR5AK3PQ8NH89 298 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CCDC107Q8WV48 283 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 FAR1Q8WVX9 515 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ART4Q93070 314 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CCDC126Q96EE4 140 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 CDKN2AIPNLQ96HQ2 116 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PGAM5Q96HS1 289 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ADGRG7Q96K78 797 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RDH12Q96NR8 316 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 OR52E6Q96RD3 313 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SLC6A7Q99884 636 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 H2AFJQ9BTM1 129 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 TEX101Q9BY14 249 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 SLC29A3Q9BZD2 475 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 RAB34Q9BZG1 259 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ACTR3CQ9C0K3 210 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 ZNF350Q9GZX5 532 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 FAM49AQ9H0Q0 323 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 P2RY12Q9H244 342 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ASAH2Q9NR71 780 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 IL17RBQ9NRM6 502 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 THSD1Q9NS62 852 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PLEKHJ1Q9NW61 149 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 GPR83Q9NYM4 423 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 OPTCQ9UBM4 332 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms