RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TSFMP43897 325 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 RPS13P62277 151 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 REEP5Q00765 189 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 RHAGQ02094 409 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 PRDX1Q06830 199 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 DMWDQ09019 674 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 RBBP4Q09028 425 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 FADDQ13158 208 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 VEZF1Q14119 521 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 NFATC4Q14934 902 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 HEPACAMQ14CZ8 416 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 LRRC36Q1X8D7 754 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 CCSMST1Q4G0I0 132 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 TMEM35AQ53FP2 167 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 C10orf25Q5T742 122 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 DEGS2Q6QHC5 323 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ZNF852Q6ZMS4 543 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 DEF8Q6ZN54 512 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SERPINA11Q86U17 422 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 NKAIN4Q8IVV8 208 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ST13P4Q8IZP2 240 aaPredicted RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 OFCC1Q8IZS5 231 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 C1orf87Q8N0U7 546 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SVOPLQ8N434 492 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 KRTCAP2Q8N6L1 136 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 C1orf52Q8N6N3 182 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 NANOGP1Q8N7R0 232 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ZNF548Q8NEK5 533 aaPredicted RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 BPIFCQ8NFQ6 507 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 OR5AR1Q8NGP9 310 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 FAM3CQ92520 227 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 FCGR1BQ92637 280 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 BIRC7Q96CA5 298 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 C4orf36Q96KX1 117 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ART5Q96L15 291 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 RNF145Q96MT1 663 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 TEFMQ96QE5 360 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 PANX1Q96RD7 426 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 DDOQ99489 341 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SEPHS2Q99611 448 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 FAM110AQ9BQ89 295 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ROGDIQ9GZN7 287 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 PIGMQ9H3S5 423 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 REEP4Q9H6H4 257 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 MAGIXQ9H6Y5 334 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 KIR3DX1Q9H7L2 352 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 KAT8Q9H7Z6 458 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 MED20Q9H944 212 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 WDR76Q9H967 626 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SPACA1Q9HBV2 294 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 HHATLQ9HCP6 504 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 AGPAT4Q9NRZ5 378 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 VAPAQ9P0L0 249 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 TAC3Q9UHF0 121 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SAMD4AQ9UPU9 718 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 MRPS33Q9Y291 106 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 PADI2Q9Y2J8 665 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 COL4A2P08572 1712 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 F5P12259 2224 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 TRAV6A0A075B6T7 132 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 PRR23AA6NEV1 266 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 HSPB2A8KAH6 182 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 GABRR3A8MPY1 467 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 C2CD4DB7Z1M9 353 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 CXCR6O00574 342 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 TXNDC9O14530 226 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 RRP8O43159 456 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 MBTPS2O43462 519 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 LATO43561 262 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 DFNA5O60443 496 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 CNOT3O75175 753 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 TRIM3O75382 744 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 WBP4O75554 376 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 TNFAIP8O95379 198 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 SEMA4FO95754 770 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 TNFP01375 233 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 IGLV3-19P01714 112 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 GPX2P18283 190 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ZNF10P21506 573 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 ELAVL4P26378 380 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 CD1BP29016 333 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 GABRA5P31644 462 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 FCGR2BP31994 310 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 S100A5P33763 92 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 AHRP35869 848 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ERFP50548 548 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 TPMTP51580 245 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ARHGDIAP52565 204 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 AQP4P55087 323 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 MTPNP58546 118 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 STXBP1P61764 594 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 DLK1P80370 383 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 C2orf80Q0P641 193 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ILF3Q12906 894 aaKnown RBP eCLIP4.64□□□□□ -1.67
SRP54-211ENST00000556445 GK3PQ14409 553 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 GK2Q14410 553 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 ATP6AP1Q15904 470 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 HSPB2Q16082 182 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 AANATQ16613 207 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms