RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ERLIN1O75477 346 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 BMP4P12644 408 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 APOBEC3AP31941 199 aaPredicted RBP19.76■□□□□ 0.75
ACTN1-220ENST00000556433 DSCR9P59020 149 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 HOXC5Q00444 222 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 CHRNB3Q05901 458 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 PRAMEF8Q5VWM4 474 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 PRAMEF7Q5VXH5 474 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 MAL2Q969L2 176 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 SLC25A36Q96CQ1 311 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 A4GALTQ9NPC4 353 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 RASD1Q9Y272 281 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 TMEM229AB2RXF0 380 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 C5orf58C9J3I9 102 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 ATP6V1G2-DDX39BF2Z307 99 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 AHSA1O95433 338 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 LGI1O95970 557 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 SELENOPP49908 381 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 STX1BP61266 288 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 LGALS3BPQ08380 585 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 NIPAL3Q6P499 406 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 EPHX4Q8IUS5 362 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 MFSD8Q8NHS3 518 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 BBS10Q8TAM1 723 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 BOD1Q96IK1 185 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 MOKQ9UQ07 419 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 PMF1-BGLAPU3KQ54 211 aa19.75■□□□□ 0.75
ACTN1-220ENST00000556433 CHD3Q12873 2000 aaKnown RBP19.75■□□□□ 0.75
ACTN1-220ENST00000556433 OR6C65A6NJZ3 312 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 ZNF587BE7ETH6 402 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 H7C417 338 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 GPRIN2O60269 458 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 BMP2P12643 396 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 FADDQ13158 208 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 BEND6Q5SZJ8 279 aaPredicted RBP19.74■□□□□ 0.75
ACTN1-220ENST00000556433 KDM8Q8N371 416 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 GOLGA6L1Q8N7Z2 621 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 OR1K1Q8NGR3 316 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 SLC35B4Q969S0 331 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 OBP2BQ9NPH6 170 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 RPS6KB2Q9UBS0 482 aa19.74■□□□□ 0.75
ACTN1-220ENST00000556433 ELOA3DA6NLF2 546 aaPredicted RBP19.73■□□□□ 0.75
ACTN1-220ENST00000556433 FTCDNL1E5RQL4 147 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 UPK3AO75631 287 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 RPS5P46782 204 aaKnown RBP19.73■□□□□ 0.75
ACTN1-220ENST00000556433 ELOA3BQ3SY89 546 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 TBRG1Q3YBR2 411 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 ZNF525Q8N782 197 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 ELOA3Q8NG57 546 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 KTI12Q96EK9 354 aaPredicted RBP19.73■□□□□ 0.75
ACTN1-220ENST00000556433 TCF7L2Q9NQB0 619 aa19.73■□□□□ 0.75
ACTN1-220ENST00000556433 POLR3GO15318 223 aaPredicted RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 PNMTP11086 282 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 HOXB9P17482 250 aaPredicted RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 GTF2E2P29084 291 aaKnown RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 EFNA4P52798 201 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 UBE2NP61088 152 aaKnown RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 EGR4Q05215 589 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 LINGO2Q7L985 606 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 HIPK1Q86Z02 1210 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 BCL2L2Q92843 193 aaPredicted RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 FBXO17Q96EF6 278 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 C7orf26Q96N11 449 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 ALKBH3Q96Q83 286 aaPredicted RBP19.72■□□□□ 0.75
ACTN1-220ENST00000556433 TNFRSF13CQ96RJ3 184 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 PTDSS2Q9BVG9 487 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 SLC25A37Q9NYZ2 338 aa19.72■□□□□ 0.75
ACTN1-220ENST00000556433 A0A096LNT2 108 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 IGHV1-18A0A0C4DH31 117 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 A8MV72 311 aaPredicted RBP19.71■□□□□ 0.75
ACTN1-220ENST00000556433 NR5A2O00482 541 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 TGDSO95455 350 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 ETS2P15036 469 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 ZNF43P17038 809 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 MRPL19P49406 292 aaKnown RBP19.71■□□□□ 0.75
ACTN1-220ENST00000556433 IDH3AP50213 366 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 CLDN17P56750 224 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 GCNT6Q5T4J0 391 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 HMBOX1Q6NT76 420 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 BLOC1S3Q6QNY0 202 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 FUNDC1Q8IVP5 155 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 MSRB3Q8IXL7 192 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 NFKBIDQ8NI38 313 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 FAM168AQ92567 244 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 SLC38A2Q96QD8 506 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 KCNS3Q9BQ31 491 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 RSPO3Q9BXY4 272 aaPredicted RBP19.71■□□□□ 0.75
ACTN1-220ENST00000556433 LINC00470Q9BZP3 86 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 SLAMF8Q9P0V8 285 aa19.71■□□□□ 0.75
ACTN1-220ENST00000556433 RTTNQ86VV8 2226 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 A0A096LPE4 126 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 A0A1W2PPZ6 126 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 SLC25A16P16260 332 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 PAX7P23759 505 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 PRKAR1BP31321 381 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 LOXL1Q08397 574 aaPredicted RBP19.7■□□□□ 0.74
ACTN1-220ENST00000556433 MST1LQ2TV78 715 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 TMEM249Q2WGJ8 235 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 LRIF1Q5T3J3 769 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 AGBL2Q5U5Z8 902 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms