RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SDF2Q99470 211 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CDCP1Q9H5V8 836 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CYSLTR2Q9NS75 346 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CBLCQ9ULV8 474 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 BORCS7-ASMTA0A0B4J1R7 106 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CHP2O43745 196 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CD53P19397 219 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 HHEXQ03014 270 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 MEF2DQ14814 521 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC25A35Q3KQZ1 300 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 LAIR1Q6GTX8 287 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 TMUB2Q71RG4 321 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR6N1Q8NGY5 312 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 EIF5A2Q9GZV4 153 aaKnown RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLAMF7Q9NQ25 335 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 A0A0J9YY10 115 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CTSLP07711 333 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 GIPP09681 153 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 TPT1P13693 172 aaKnown RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF41P51814 821 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 TRMT12Q53H54 448 aaKnown RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 EOGTQ5NDL2 527 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 EXO1Q9UQ84 846 aaKnown RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 GPR171O14626 319 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 NID1P14543 1247 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SOX9P48436 509 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 GALK2Q01415 458 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SPOCK1Q08629 439 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 CLPPQ16740 277 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 PRR22Q8IZ63 422 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ADAMTS18Q8TE60 1221 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ARSGQ96EG1 525 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 KLHDC7BQ96G42 594 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC25A44Q96H78 314 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 WASH6PQ9NQA3 447 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ETV7Q9Y603 341 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 MIA3Q5JRA6 1907 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 RFX2P48378 723 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF616Q08AN1 781 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR7E24Q6IFN5 339 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC51BQ86UW2 128 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR7G2Q8NG99 324 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR4Q3Q8NH05 313 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SEC22AQ96IW7 307 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 TGM7Q96PF1 710 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 NXF2Q9GZY0 626 aaKnown RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SFXN1Q9H9B4 322 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PPIL1Q9Y3C6 166 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SYT7O43581 403 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC16A7O60669 478 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 TGM6O95932 706 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 RAD52P43351 418 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR9A4Q8NGU2 314 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR5H2Q8NGV7 314 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 DVL3Q92997 716 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 NXPE3Q969Y0 559 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 GIMAP5Q96F15 307 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PDE7BQ9NP56 450 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 KCNIP3Q9Y2W7 256 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 TMEM212A6NML5 194 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF79Q15937 498 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 DPY19L2P2Q6ZN68 376 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF704Q6ZNC4 412 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PXT1Q8NFP0 134 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR51D1Q8NGF3 324 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 DAZLQ92904 295 aaKnown RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 RASD2Q96D21 266 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 CNRIP1Q96F85 164 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 HRASLSQ9HDD0 168 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ARID1BQ8NFD5 2236 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PPM1DO15297 605 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 P2RX6O15547 441 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PRAMEF4O60810 478 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 TP53P04637 393 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 DPTQ07507 201 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 ARHGAP11BQ3KRB8 267 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 PRAMEF9Q5VWM5 478 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 CMTM4Q8IZR5 234 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 MARVELD1Q9BSK0 173 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 MIXL1Q9H2W2 232 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 METTL7AQ9H8H3 244 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 APMAPQ9HDC9 416 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 MAN2C1Q9NTJ4 1040 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 C2orf42Q9NWW7 574 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC23A2Q9UGH3 650 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 MBD1Q9UIS9 605 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 HHLA2Q9UM44 414 aa13.88□□□□□ -0.19
ARHGEF40-207ENST00000556399 C17orf105B2RV13 164 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms