RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 RTN4RQ9BZR6 473 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 WDR12Q9GZL7 423 aaKnown RBP7.54□□□□□ -1.2
ATXN3-235ENST00000556082 NDEL1Q9GZM8 345 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 FKRPQ9H9S5 495 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 APMAPQ9HDC9 416 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 HMG20AQ9NP66 347 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 MMP25Q9NPA2 562 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 AKIP1Q9NQ31 210 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 IL20RAQ9UHF4 553 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF229Q9UJW7 825 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 SEC16AO15027 2179 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 RP1P56715 2156 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
ATXN3-235ENST00000556082 A0A075B6Q4 140 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 IGLV3-32A0A0A0MS00 114 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 LOC100506127A0A0U1RQW1 187 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 TRDV1A0A1B0GX56 115 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 TMEM200CA6NKL6 621 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ETV2O00321 342 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SOCS6O14544 535 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 AKAP8O43823 692 aaKnown RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 FOXD2O60548 495 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 NPIPB7O75200 414 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 PPP1R3DO95685 299 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 MT-ATP6P00846 226 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 CD14P08571 375 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GP1BBP13224 206 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 AVPR2P30518 371 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GABRA5P31644 462 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 UQCRC1P31930 480 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 EVI2BP34910 448 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ATP6V1E1P36543 226 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 OPRL1P41146 370 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SOX3P41225 446 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 PI4KAP42356 2102 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 POLR2HP52434 150 aaKnown RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SLC25A1P53007 311 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ACTC1P68032 377 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ACTA1P68133 377 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 EGR4Q05215 589 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 LGALS3BPQ08380 585 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 CRMP1Q14194 572 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GGTLC2Q14390 218 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ANGPT1Q15389 498 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF404Q494X3 552 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SLC35D3Q5M8T2 416 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GPR139Q6DWJ6 353 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 LCN10Q6JVE6 187 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 PAQR6Q6TCH4 344 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SHISA6Q6ZSJ9 500 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GRINAQ7Z429 371 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 PRR22Q8IZ63 422 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GATSQ8NAP1 163 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 POMGNT2Q8NAT1 580 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 OR4F15Q8NGB8 312 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 B4GALNT2Q8NHY0 566 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 MCFD2Q8NI22 146 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF563Q8TA94 476 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 STK35Q8TDR2 534 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 GPR119Q8TDV5 335 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 TMEM234Q8WY98 164 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ST8SIA1Q92185 356 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 TM9SF4Q92544 642 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 UFD1Q92890 307 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF524Q96C55 264 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ERMAPQ96PL5 475 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SECISBP2Q96T21 854 aaKnown RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZPBPQ9BS86 351 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 MED18Q9BUE0 208 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 CRB3Q9BUF7 120 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 CDADC1Q9BWV3 514 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF700Q9H0M5 742 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SYNDIG1Q9H7V2 258 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ZBTB20Q9HC78 741 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 NANSQ9NR45 359 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 ASB6Q9NWX5 421 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 BABAM2Q9NXR7 383 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 AKAP7Q9P0M2 348 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 MYOTQ9UBF9 498 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SSR3Q9UNL2 185 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
ATXN3-235ENST00000556082 NOX1Q9Y5S8 564 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 SDK1Q7Z5N4 2213 aa7.53□□□□□ -1.2
ATXN3-235ENST00000556082 COL5A1P20908 1838 aaPredicted RBP7.52□□□□□ -1.2
ATXN3-235ENST00000556082 TRAV36DV7A0A075B6V5 113 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 IGHV3-20A0A0C4DH32 117 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 TRBV11-1A0A0K0K1C0 115 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 FAM183AA6NL82 134 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 A8MVM7 634 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ZNF670-ZNF695F2Z2N8 137 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 TAF4O00268 1085 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 IL1AP01583 271 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 IGHEP01854 428 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SBK2P0C263 348 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 HIST1H1CP16403 213 aaKnown RBP7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ZNF12P17014 697 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms