RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 OR6S1Q8NH40 331 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 DNAJA4Q8WW22 397 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 FAM168AQ92567 244 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 AURKBQ96GD4 344 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF385AQ96PM9 386 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 PAIP2Q9BPZ3 127 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 KATNB1Q9BVA0 655 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CENPHQ9H3R5 247 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 WDR55Q9H6Y2 383 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 RLIMQ9NVW2 624 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 NKIRAS1Q9NYS0 192 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 LPAR3Q9UBY5 353 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CDC42EP3Q9UKI2 254 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 RCE1Q9Y256 329 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CHST2Q9Y4C5 530 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ATRQ13535 2644 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 FTCDNL1E5RQL4 147 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF587BE7ETH6 402 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 CLIC1O00299 241 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 KRT33AO76009 404 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 AKR7A3O95154 331 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 AHSA1O95433 338 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 IGKV3-15P01624 115 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 CRYAAP02489 173 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 C1QCP02747 245 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 GKN3PP0CG01 181 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 FAM157CP0CG43 387 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ETFAP13804 333 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF43P17038 809 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 PPIBP23284 216 aaKnown RBP6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 PRKAR1BP31321 381 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 NME5P56597 212 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 RGNQ15493 299 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 EFNB3Q15768 340 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 MST1LQ2TV78 715 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 TBRG1Q3YBR2 411 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF311Q5JNZ3 666 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 FAM91A1Q658Y4 838 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 NXNQ6DKJ4 435 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 HMBOX1Q6NT76 420 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ANKRD16Q6P6B7 361 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF836Q6ZNA1 936 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 VRK2Q86Y07 508 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 EPHX4Q8IUS5 362 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 MIER2Q8N344 545 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 CLIP4Q8N3C7 705 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 OR1K1Q8NGR3 316 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 BBS10Q8TAM1 723 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 C10orf105Q8TEF2 133 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 GTF2H4Q92759 462 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 BCL2L2Q92843 193 aaPredicted RBP6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 C3orf49Q96BT1 292 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM19Q96HH6 336 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 LRR1Q96L50 414 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 OXGR1Q96P68 337 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC38A2Q96QD8 506 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 SPATA5L1Q9BVQ7 753 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 A4GALTQ9NPC4 353 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 YAE1D1Q9NRH1 226 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF443Q9Y2A4 671 aaPredicted RBP6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 PCDHB14Q9Y5E9 798 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 ATP23Q9Y6H3 246 aa6.8□□□□□ -1.32
PTCSC3-201ENST00000556013 LOC390937A0A1W2PQ73 354 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 VWC2LB2RUY7 222 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 AIM2O14862 343 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 FRS3O43559 492 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 AKAP8O43823 692 aaKnown RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ERLIN1O75477 346 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF432O94892 652 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 BCHEP06276 602 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 KITP10721 976 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 PNMTP11086 282 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 CBR1P16152 277 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 NCF2P19878 526 aaPredicted RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 USF1P22415 310 aaPredicted RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 SERPINF1P36955 418 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 GZMKP49863 264 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 PDLIM4P50479 330 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 UBE2NP61088 152 aaKnown RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 POU3F1Q03052 451 aaPredicted RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 EGR4Q05215 589 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC9B1Q4ZJI4 515 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 LRIF1Q5T3J3 769 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 C6orf52Q5T4I8 152 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 FAM69AQ5T7M9 428 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ULK3Q6PHR2 472 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 EPGNQ6UW88 154 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 UGT2A3Q6UWM9 527 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 B3GLCTQ6Y288 498 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 GPAT4Q86UL3 456 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 CADM2Q8N3J6 435 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ANKRD42Q8N9B4 389 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 MAPK1IP1LQ8NDC0 245 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ADPRHL1Q8NDY3 354 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms